Pairwise Alignments

Query, 336 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 344 a.a., dipeptide transport ATP-binding protein DppF from Phaeobacter inhibens DSM 17395

 Score =  279 bits (713), Expect = 8e-80
 Identities = 151/331 (45%), Positives = 216/331 (65%), Gaps = 12/331 (3%)

Query: 10  EKKLLLDVKDLKVHFNITP--------KSAWPWTKPVTLKAVDGVNVRLYEGETLGVVGE 61
           + K LL++K+L+  F +          +      +   + AV+ V++    GE L +VGE
Sbjct: 7   DSKPLLELKNLEKRFELDKGFLETIKLRGGRITREKRAVHAVNNVSLSADRGEALCIVGE 66

Query: 62  SGCGKSTFARAIIGLVQATHGEVVWLGQDLTRMQEVKRRATRKQIQMIFQDPLASLNPRM 121
           SGCGKST AR + GL+  + GE+ + G+ +      +    RK++QMIFQ+P ASLNPRM
Sbjct: 67  SGCGKSTVARLVAGLLAPSGGEIHYDGERIDDRSRGEMMPLRKKMQMIFQNPYASLNPRM 126

Query: 122 TVGDIIAEPLQTFYPELSKQEVKDRVKEMMAKVGLLPNVINRYPHEFSGGQCQRIGIARA 181
           T+   + EP++   P LS+ EV+D+V E+M  VG+ P+  +RYPHEFSGGQ QRI IARA
Sbjct: 127 TIQQALEEPVRHHNPSLSRGEVRDKVSEVMRSVGVDPSWSSRYPHEFSGGQRQRIAIARA 186

Query: 182 LILKPKMIICDEPVSALDVSIQAQVVNLLKELQKELGLSLVFIAHDLSVVKHISDRVLVM 241
           L + P+ II DEP+SALDVSIQAQV+NL+ E + + GL+  FI HDLSVV+H   RV V+
Sbjct: 187 LTVDPEFIIADEPISALDVSIQAQVLNLMLEAKDQRGLTYFFITHDLSVVEHFGTRVAVL 246

Query: 242 YLGNAVELGVSKELFANPKHPYTKALMSAVPIPDPNIERNKTIQMLEGDLPSPMNPPSGC 301
           YLG   EL  ++ LF NPKHPYTKAL+SAVP      ++ +    L+G++P+P+N P GC
Sbjct: 247 YLGTLCELADTQTLFENPKHPYTKALLSAVP---QLKDQGQNHIRLQGEIPTPINLPQGC 303

Query: 302 VFRTRCPQATAECAKTKP-VIKGSDIHSVSC 331
            F+TRC  A A C +++P  ++ +D  +V+C
Sbjct: 304 PFQTRCAFANARCRESRPRPLRQADGSTVAC 334