Pairwise Alignments

Query, 336 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 332 a.a., oligopeptide ABC transporter, ATP binding protein from Phaeobacter inhibens DSM 17395

 Score =  277 bits (709), Expect = 2e-79
 Identities = 154/326 (47%), Positives = 218/326 (66%), Gaps = 8/326 (2%)

Query: 14  LLDVKDLKVHFNITPKSAWPWTKPV---TLKAVDGVNVRLYEGETLGVVGESGCGKSTFA 70
           ++++ DL + F + P+S     +      ++A++GV++ L +GETLGVVGESGCGKST A
Sbjct: 5   VMEIDDLSLTFQL-PRSLVDVIRKQPGRAVRALNGVSLALQKGETLGVVGESGCGKSTLA 63

Query: 71  RAIIGLVQATHGEVVWLGQDLTRMQEVKRRATRKQIQMIFQDPLASLNPRMTVGDIIAEP 130
           R I+ L Q   G +   GQD+      + R+  +++QM+FQDP +SLNPRMT G I++E 
Sbjct: 64  RCIVRLYQPQGGSIRHHGQDIFAEGARRDRSYNRRVQMMFQDPYSSLNPRMTCGQILSEA 123

Query: 131 LQTFYPELSKQEVKDRVKEMMAKVGLLPNVINRYPHEFSGGQCQRIGIARALILKPKMII 190
           L   +      E+  RV+E++  V L  +   + PHEFSGGQ QRI IARAL ++P+++I
Sbjct: 124 LHV-HKMRPADEIPARVEELLELVRLPADAAQKLPHEFSGGQRQRIAIARALAVEPEVLI 182

Query: 191 CDEPVSALDVSIQAQVVNLLKELQKELGLSLVFIAHDLSVVKHISDRVLVMYLGNAVELG 250
            DE VSALDVS+QAQVVNLL ELQ++L L+++F+AHDL +V+H+S RV V+YLG  VE+G
Sbjct: 183 ADELVSALDVSVQAQVVNLLLELQEQLDLTILFVAHDLRLVRHVSHRVAVIYLGRIVEIG 242

Query: 251 VSKELFANPKHPYTKALMSAVPIPDPNIERNKTIQMLEGDLPSPMNPPSGCVFRTRCPQA 310
            S+ LFANP HPY++AL+SA P  DP+ +    I+ LEG+LPSP+N P GC F  RC  A
Sbjct: 243 DSETLFANPAHPYSQALLSAAPSLDPD-DTGDAIR-LEGELPSPLNVPPGCPFHVRCAHA 300

Query: 311 TAECAKTKPVIKG-SDIHSVSCLYAE 335
              C +  P ++   D   V+C  AE
Sbjct: 301 ADVCRRDVPRLRPLGDRGEVACHLAE 326