Pairwise Alignments

Query, 336 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 670 a.a., oligopeptide/dipeptide ABC transporter, ATP-binding protein from Dechlorosoma suillum PS

 Score =  277 bits (708), Expect = 6e-79
 Identities = 147/306 (48%), Positives = 207/306 (67%), Gaps = 5/306 (1%)

Query: 14  LLDVKDLKVHFNITPKSAWPWTKPVTLKAVDGVNVRLYEGETLGVVGESGCGKSTFARAI 73
           LL V +LKVHF I  K  +  T    +KAVDGV++ L  G TL +VGESGCGK+T  +A+
Sbjct: 351 LLAVGELKVHFPIR-KGLFKRTVG-HVKAVDGVSLELQRGRTLALVGESGCGKTTAGKAV 408

Query: 74  IGLVQATHGEVVWLGQDLTRMQEVKRRATRKQIQMIFQDPLASLNPRMTVGDIIAEPLQT 133
           + L+ AT G V   G++L  + E + +  R+++QM+FQDP ASLNPR+TVG+II E +  
Sbjct: 409 LRLLPAT-GSVRLDGRELLGLPERELKPLRRRMQMVFQDPFASLNPRLTVGEIIEEGMTA 467

Query: 134 FYPELSKQEVKDRVKEMMAKVGLLPNVINRYPHEFSGGQCQRIGIARALILKPKMIICDE 193
                S+ E +  +  ++  VGL    + RYPHEFSGGQ QRI IARAL ++P++++CDE
Sbjct: 468 LRVAASRDERRAALAALLESVGLPAEALGRYPHEFSGGQRQRIAIARALAVQPELLVCDE 527

Query: 194 PVSALDVSIQAQVVNLLKELQKELGLSLVFIAHDLSVVKHISDRVLVMYLGNAVELGVSK 253
           P SALDVS+QAQ++NLL+ LQ+ELGL+ +FI H+ +VV++++  V VMYLG  VE G  +
Sbjct: 528 PTSALDVSVQAQILNLLRRLQEELGLAYLFITHNFAVVEYLAHDVAVMYLGRIVEQGPVQ 587

Query: 254 ELFANPKHPYTKALMSAVPIPDPNIERNKTIQMLEGDLPSPMNPPSGCVFRTRCPQATAE 313
           ++ A P HPYT+AL+SAV  P+P +   + +  L G+ PSP  PP GC F  RC QA+  
Sbjct: 588 QVLAAPCHPYTRALLSAV--PEPRLAGQREMVRLPGETPSPARPPQGCHFHPRCAQASER 645

Query: 314 CAKTKP 319
           C +  P
Sbjct: 646 CRQEYP 651



 Score =  185 bits (469), Expect = 3e-51
 Identities = 117/313 (37%), Positives = 168/313 (53%), Gaps = 20/313 (6%)

Query: 14  LLDVKDLKVHFNITPKSAWPWTKPVTLKAVDGVNVRLYEGETLGVVGESGCGKSTFARAI 73
           LL V++LK  F    +          L AVDGV+  +  GET  ++GESGCGKS  A A+
Sbjct: 4   LLSVRNLKAGFLAGGR---------VLTAVDGVSFAVAPGETFALLGESGCGKSATALAL 54

Query: 74  IGLVQAT---HGEVVWL-GQDLTRMQEVKRRATR-KQIQMIFQDPLASLNPRMTVGDIIA 128
           + L+       G  VWL G+++  + E   R  R     MIFQ+P  SLNP +T+G  I 
Sbjct: 55  LRLLPNAGRIQGGEVWLEGEEILALPEAAMRDRRGSAAAMIFQEPATSLNPVLTIGRQIG 114

Query: 129 EPLQTFYPELSKQEVKDRVKEMMAKVGLLP--NVINRYPHEFSGGQCQRIGIARALILKP 186
           E L+  +  +  +  +     ++  VG+      +  YP + SGG  QR  IA AL  +P
Sbjct: 115 ESLER-HRGMKGEAARREALALLTAVGIADPERRLEEYPFQLSGGMKQRAMIAIALAGEP 173

Query: 187 KMIICDEPVSALDVSIQAQVVNLLKELQKELGLSLVFIAHDLSVVKHISDRVLVMYLGNA 246
           +++I DEP +ALDV+IQAQ+++LL  LQ E  + ++ I HDL VV   + RV VMY G  
Sbjct: 174 RLLIADEPTTALDVTIQAQILDLLARLQAERAMGMLLITHDLGVVARSAHRVGVMYAGEI 233

Query: 247 VELGVSKELFANPKHPYTKALMSAVPIPDPNIERNKTIQMLEGDLPSPMNPPSGCVFRTR 306
           VE    +E FA+P+HPYT+ L +A+P      +R   +  + G +P     P+GC F  R
Sbjct: 234 VETAPRQEFFASPRHPYTQKLFAALPDLG---QRGAQLATIPGQVPGLAAMPAGCRFAPR 290

Query: 307 CPQATAECAKTKP 319
           CP A   C    P
Sbjct: 291 CPVAMDRCRLESP 303