Pairwise Alignments

Query, 324 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 625 a.a., peptide transport system ATP-binding ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  271 bits (694), Expect = 2e-77
 Identities = 136/258 (52%), Positives = 184/258 (71%), Gaps = 1/258 (0%)

Query: 4   LLDVKDLRVEFSTQDGIVTAVNDLNFSLKQGETLGIVGESGSGKSQTVFAIMGLLAKNG- 62
           +L V +L   F       + V  ++F +   ET+ +VGESGSGKS T  +IM L +  G 
Sbjct: 27  VLSVSNLMCSFRADGLWSSVVQGVSFDIGARETVAVVGESGSGKSVTALSIMRLNSPRGT 86

Query: 63  KITGSAKFEGKEILNLPERELNKVRAEQIAMIFQDPMTSLNPYMKVSDQLMEVLMLHKGM 122
           KI GS K  GKE+L+L + E+ ++R   IAMIFQ+PMTSLNP + +  Q+ E L+LH+G+
Sbjct: 87  KIEGSVKLGGKELLSLSDAEMRQIRGNDIAMIFQEPMTSLNPVLTIGFQIAESLILHRGL 146

Query: 123 GKAEAFEESVRMLEAVKIPEARKRITMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTT 182
            +A+A  E++R+LE V+IP A+ R   YPH FSGGMRQRVMIAMAL C+PKLLIADEPTT
Sbjct: 147 SRAQAENETIRLLEKVRIPAAKSRFHEYPHRFSGGMRQRVMIAMALACKPKLLIADEPTT 206

Query: 183 ALDVTVQAQIMELLNELKREFNTAIIMITHDLGVVAGSCDKVLVMYAGRTMEYGSVNDIF 242
           ALDVT+QAQI+EL+ EL++E   +++ ITHD+GVVA   D+ +VMY G+ +E  S +DIF
Sbjct: 207 ALDVTIQAQILELIKELQQEDGMSVLFITHDMGVVAEIADRTVVMYKGQAVETASTDDIF 266

Query: 243 YNPSHPYAEGLLSAIPRL 260
             P+HPY   LLSA+P+L
Sbjct: 267 NRPNHPYTRSLLSAVPKL 284



 Score =  193 bits (490), Expect = 1e-53
 Identities = 108/249 (43%), Positives = 154/249 (61%), Gaps = 8/249 (3%)

Query: 14  FSTQDGIVTAVNDLNFSLKQGETLGIVGESGSGKSQTVFAIMGLLAKNGKITGSAKFEGK 73
           FST  G V AV +++FS+K GETL +VGESG GKS T  ++M L+  +G   G    +G 
Sbjct: 340 FSTVKGCVHAVENVSFSIKAGETLALVGESGCGKSTTGRSVMRLVEPSG---GLVLLDGV 396

Query: 74  EILNLPERELNKVRAEQIAMIFQDPMTSLNPYMKVSDQLMEVLMLHKGMGKAEAFEESVR 133
           ++L L + EL   R   + MIFQDP  SLNP M +   + E L+++   G++E  ++   
Sbjct: 397 DVLKLSQNELRHQR-NHMQMIFQDPYASLNPRMNIGTAIAEPLLINGKGGQSEVADKVAE 455

Query: 134 MLEAVKI-PEARKRITMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQI 192
           +L+ V + P+  KR   +PHEFSGG RQR+ IA AL   PKL++ADE  +ALDV+V++Q+
Sbjct: 456 LLQKVGLSPDMAKR---FPHEFSGGQRQRICIARALALEPKLIVADEAVSALDVSVKSQV 512

Query: 193 MELLNELKREFNTAIIMITHDLGVVAGSCDKVLVMYAGRTMEYGSVNDIFYNPSHPYAEG 252
           + L+ +L+     A + I+HD+ VV     +V VMY G  +E GS   IF NP HPY   
Sbjct: 513 VNLMLDLQARMGLAYLFISHDMAVVERVSHRVAVMYLGEIVEAGSREAIFQNPQHPYTRR 572

Query: 253 LLSAIPRLD 261
           LLSA+P  D
Sbjct: 573 LLSAVPIAD 581