Pairwise Alignments

Query, 324 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 327 a.a., oligopeptide transport ATP-binding ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  302 bits (774), Expect = 6e-87
 Identities = 151/314 (48%), Positives = 213/314 (67%), Gaps = 2/314 (0%)

Query: 4   LLDVKDLRVEFSTQDGIVTAVNDLNFSLKQGETLGIVGESGSGKSQTVFAIMGLLAKNGK 63
           +++V++LRV+F ++ G VTA++D++ S++ GE LG+VGESG+GKS T  AI GLL   G 
Sbjct: 8   VIEVRNLRVDFPSRRGTVTALSDVSLSIRPGEILGVVGESGAGKSMTGLAIQGLLEAPGH 67

Query: 64  ITGSAKFEGKEILN-LPERELNKVRAEQIAMIFQDPMTSLNPYMKVSDQLMEVLMLHKGM 122
           I G   + GK  ++ L +R + K+R  +I  IFQDP+TSLNP   V  QL+E +  H G 
Sbjct: 68  IAGGEVWLGKRRIDTLDDRAMEKIRGREIGAIFQDPLTSLNPLFSVGAQLVETIRRHLGF 127

Query: 123 GKAEAFEESVRMLEAVKIPEARKRITMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTT 182
           GKAEA   +V++L  V IP   +R+  YPH+FSGGMRQRV+IA+AL   PKL+IADEPTT
Sbjct: 128 GKAEARARAVQLLRDVGIPSPEERVNQYPHQFSGGMRQRVVIALALAASPKLVIADEPTT 187

Query: 183 ALDVTVQAQIMELLNELKREFNTAIIMITHDLGVVAGSCDKVLVMYAGRTMEYGSVNDIF 242
           ALDV++QAQI+ LL +L +E  TA++++THD+GV+A + D++ VMYAGR +E G+V  + 
Sbjct: 188 ALDVSIQAQIISLLRKLCKEKQTAVMLVTHDMGVIAEAADRIAVMYAGRLIEIGAVEQVL 247

Query: 243 YNPSHPYAEGLLSAIPRLDTEGEVLPTIPGNPPNLLRLPVGCPYQERCHRVTDRCKREAP 302
           + P HPY +GL+ +IP L    E L  I G+ P L  +P GC +  RC     RC+RE P
Sbjct: 248 HQPRHPYTQGLMGSIPSLGARVERLNQIDGSMPRLDAIPDGCAFNPRCKMAGPRCRRERP 307

Query: 303 ILLPFGNSRQRACF 316
            L+ F      AC+
Sbjct: 308 ELI-FAGPSASACW 320