Pairwise Alignments

Query, 324 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 533 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  268 bits (684), Expect = 3e-76
 Identities = 138/256 (53%), Positives = 176/256 (68%)

Query: 3   SLLDVKDLRVEFSTQDGIVTAVNDLNFSLKQGETLGIVGESGSGKSQTVFAIMGLLAKNG 62
           S+L V+ L+V+F T DG V AV  ++  ++ GETL +VGESGSGKSQT+  IMGLLAKNG
Sbjct: 7   SILAVRGLKVDFYTPDGTVEAVKGIDLDVRSGETLAVVGESGSGKSQTMMGIMGLLAKNG 66

Query: 63  KITGSAKFEGKEILNLPERELNKVRAEQIAMIFQDPMTSLNPYMKVSDQLMEVLMLHKGM 122
            +TGSA++ G+E++ L  + LNKVR  +I MIFQ+PMTSL+P   +  Q+ E ++ H+G 
Sbjct: 67  TVTGSARYRGQELVGLAPKALNKVRGSKITMIFQEPMTSLDPLYTIGRQIAEPIVHHRGG 126

Query: 123 GKAEAFEESVRMLEAVKIPEARKRITMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTT 182
              EA    + +LE V IPE  +RI  YPHE SGG RQRVMIAMAL   P +LIADEPTT
Sbjct: 127 SFKEARRRVLELLELVGIPEPGRRIDSYPHELSGGQRQRVMIAMALANEPDILIADEPTT 186

Query: 183 ALDVTVQAQIMELLNELKREFNTAIIMITHDLGVVAGSCDKVLVMYAGRTMEYGSVNDIF 242
           ALDVT+QAQI++LL  L+R F  AI++ITHDLG+V    D+V VM  G  +E G   DIF
Sbjct: 187 ALDVTIQAQILDLLKSLQRRFGMAIVLITHDLGIVKYFADRVAVMRRGEVVEQGMTADIF 246

Query: 243 YNPSHPYAEGLLSAIP 258
             P   Y   LL A P
Sbjct: 247 ERPKGDYTRMLLEAEP 262



 Score =  166 bits (419), Expect = 2e-45
 Identities = 99/262 (37%), Positives = 156/262 (59%), Gaps = 17/262 (6%)

Query: 4   LLDVKDLRVEFSTQDGIVT-------AVNDLNFSLKQGETLGIVGESGSGKSQTVFAIMG 56
           +L+ +++ V+++   G+         AV+ +N  L+QG+T+GIVGESGSGKS    A++ 
Sbjct: 276 ILEGRNVAVDYTIPGGLFRGASAAFRAVDGVNLRLRQGQTIGIVGESGSGKSTLGRALLR 335

Query: 57  LLAKNGKITGSAKFEGKEILNLPERELNKVRAEQIAMIFQDPMTSLNPYMKVSDQLMEVL 116
           LL  +G      +F   +I       +  +R  Q+ ++FQDP  SL+P   V + + E L
Sbjct: 336 LLPSSGYY----RFGSTDISGFDRGAMRPLR-RQLQLVFQDPYGSLSPRRTVGEIITEGL 390

Query: 117 MLHK-GMGKAEAFEESVRMLEAVKI-PEARKRITMYPHEFSGGMRQRVMIAMALLCRPKL 174
            +H+  + +A+    ++  L+ V + P +R R   YPHEFSGG RQR+ IA A++ +PK+
Sbjct: 391 HVHEPDLSRADRDRRAIAALKEVGLDPASRNR---YPHEFSGGQRQRIAIARAIILKPKV 447

Query: 175 LIADEPTTALDVTVQAQIMELLNELKREFNTAIIMITHDLGVVAGSCDKVLVMYAGRTME 234
           +I DEPT+ALD +VQ Q++ELL +L+ +   + I I+HDL VV    D V+VM  GR +E
Sbjct: 448 VILDEPTSALDRSVQGQVIELLRDLQEKHGLSYIFISHDLSVVKAMSDYVIVMKNGRIVE 507

Query: 235 YGSVNDIFYNPSHPYAEGLLSA 256
            G  + IF  P  PY + L+ A
Sbjct: 508 EGETDAIFDAPREPYTKTLIGA 529