Pairwise Alignments

Query, 324 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 342 a.a., Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like (NCBI) from Rhodospirillum rubrum S1H

 Score =  281 bits (718), Expect = 2e-80
 Identities = 150/316 (47%), Positives = 202/316 (63%), Gaps = 1/316 (0%)

Query: 2   MSLLDVKDLRVEFSTQDGIVTAVNDLNFSLKQGETLGIVGESGSGKSQTVFAIMGLLAKN 61
           MSLL++++L VEF + D    AV D++FS+  GE LGIVGESGSGKS +  A+MGL+A  
Sbjct: 1   MSLLEIENLTVEFGSGDKPFRAVEDVSFSVDAGEVLGIVGESGSGKSVSSLAMMGLVAYP 60

Query: 62  GKITGSAK-FEGKEILNLPERELNKVRAEQIAMIFQDPMTSLNPYMKVSDQLMEVLMLHK 120
           G++  S   F+G ++L L  R+  K+    +AMIFQ+PMTSLNP   +  Q+ E L +H+
Sbjct: 61  GRVKASKMVFDGIDLLTLSGRQRRKLTGSDVAMIFQEPMTSLNPCFTIGYQITETLKIHQ 120

Query: 121 GMGKAEAFEESVRMLEAVKIPEARKRITMYPHEFSGGMRQRVMIAMALLCRPKLLIADEP 180
           G  +A+  + ++ +L  V IP+   R+ ++PH+ SGGM QRVMIAMA+ C P+LLIADEP
Sbjct: 121 GGTRAQRRDRAIELLSQVGIPDPGSRLGLFPHQLSGGMSQRVMIAMAVACDPRLLIADEP 180

Query: 181 TTALDVTVQAQIMELLNELKREFNTAIIMITHDLGVVAGSCDKVLVMYAGRTMEYGSVND 240
           TTALDVT+QAQIM LL  L+ +    +++ITHDL VVA +  +V+VMYAG+ ME G+V  
Sbjct: 181 TTALDVTIQAQIMHLLLTLQEKRGMGMVLITHDLAVVAEAAHRVVVMYAGQVMETGAVPA 240

Query: 241 IFYNPSHPYAEGLLSAIPRLDTEGEVLPTIPGNPPNLLRLPVGCPYQERCHRVTDRCKRE 300
           IF  P HPY   LL A+P        L TIPG  P     P GC    RC    DRC+ E
Sbjct: 241 IFDRPHHPYTAALLEALPERAEGKRRLNTIPGVVPGAHDRPKGCLLAPRCAFAQDRCRAE 300

Query: 301 APILLPFGNSRQRACF 316
            P L P  + + R  F
Sbjct: 301 RPSLTPTDSGQVRCFF 316