Pairwise Alignments

Query, 324 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 344 a.a., Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like (NCBI) from Rhodospirillum rubrum S1H

 Score =  301 bits (772), Expect = 1e-86
 Identities = 156/315 (49%), Positives = 219/315 (69%), Gaps = 4/315 (1%)

Query: 4   LLDVKDLRVEFSTQDGIVTAVNDLNFSLKQGETLGIVGESGSGKSQTVFAIMGLLAK-NG 62
           LLDV+DLRV F ++ G+V AV+ ++FS+ + E +G+VGESGSGK+QT+ ++MGL+   N 
Sbjct: 8   LLDVRDLRVSFRSERGLVRAVDGVSFSVGRQEIVGLVGESGSGKTQTLLSLMGLIDDPNA 67

Query: 63  KITGSAKFEGKEILNLPERELNKVRAEQIAMIFQDPMTSLNPYMKVSDQLMEVLMLHKGM 122
            + G  +F G+++L LP + L  +R  +IAMIFQDPMTSL P  +V DQ++E ++ HKG 
Sbjct: 68  IVEGEVRFLGEDLLRLPRKALQALRGGKIAMIFQDPMTSLTPVHRVGDQIVEQILAHKGG 127

Query: 123 GKAEAFEESVRMLEAVKIPEARKRITMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTT 182
            +  A ++++ +LEAV+I      +  YPHE SGGMRQRV+IAMAL C P LL+ADEPTT
Sbjct: 128 SRRAARDKALALLEAVRIANPTAVVARYPHELSGGMRQRVLIAMALSCDPALLLADEPTT 187

Query: 183 ALDVTVQAQIMELLNELKREFNTAIIMITHDLGVVAGSCDKVLVMYAGRTMEYGSVNDIF 242
           ALDVTVQAQI++L+  L+ +F +++I++THDLGVVA   D+VLVMY GR +E G ++++F
Sbjct: 188 ALDVTVQAQILDLIGRLRGDFASSVILVTHDLGVVAEVADRVLVMYGGRVVEEGLMDEVF 247

Query: 243 YNPSHPYAEGLLSAIPRLD-TEGEVLPTIPGNPPNLLRLPVGCPYQERCHRVTDRCKREA 301
            +P HPY  GL  +IP L+      L +IPGNPP L  LP GC +  RC    D C    
Sbjct: 248 RDPLHPYTWGLFDSIPPLEGPRPRRLRSIPGNPPTLSSLPPGCAFGPRCRCRFDACSISP 307

Query: 302 PILLPFGNSRQRACF 316
           P+    GN R+ AC+
Sbjct: 308 PV-QRLGN-RRFACY 320