Pairwise Alignments

Query, 324 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 326 a.a., putative dipeptide transport ATP-binding protein DppD from Phaeobacter inhibens DSM 17395

 Score =  291 bits (746), Expect = 1e-83
 Identities = 150/314 (47%), Positives = 202/314 (64%), Gaps = 2/314 (0%)

Query: 4   LLDVKDLRVEFSTQDGIVTAVNDLNFSLKQGETLGIVGESGSGKSQTVFAIMGLLAKNGK 63
           +L ++DL VE  T+   + A + +++ +  GE LG+VGESG+GKS    A++GLL    +
Sbjct: 5   VLSIRDLVVEIPTRHARLCATDKVSYDIAPGEILGVVGESGAGKSMAGNAVIGLLNPPAR 64

Query: 64  ITGSA-KFEGKEILNLPERELNKVRAEQIAMIFQDPMTSLNPYMKVSDQLMEVLMLHKGM 122
           ITG   +  G+ I NLP  ++ ++R ++I MIFQDP+TSLNP +++ DQL E +M H  +
Sbjct: 65  ITGGEIRLNGQRIDNLPREKMRRLRGKEIGMIFQDPLTSLNPLLRIGDQLTETMMEHLEL 124

Query: 123 GKAEAFEESVRMLEAVKIPEARKRITMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTT 182
            K EA   ++  LE V IP A +RI  YPHEFSGGMRQRV+IA+AL   P L+IADEPTT
Sbjct: 125 TKPEARARAIAALEEVGIPAASERIDSYPHEFSGGMRQRVVIALALCAEPSLIIADEPTT 184

Query: 183 ALDVTVQAQIMELLNELKREFNTAIIMITHDLGVVAGSCDKVLVMYAGRTMEYGSVNDIF 242
           ALDV+VQAQI+ LL  L RE  TA+++ITHD+GV+A + D+V VMYAGR  E G V D+ 
Sbjct: 185 ALDVSVQAQIIALLKRLCRERGTAVMLITHDMGVIAEAADRVAVMYAGRMAEIGDVRDVV 244

Query: 243 YNPSHPYAEGLLSAIPRLDTEGEVLPTIPGNPPNLLRLPVGCPYQERCHRVTDRCKREAP 302
             P HPY +GL+ + P        L  IPG  P L  LP GC +  RC R  +RC+   P
Sbjct: 245 TRPRHPYTDGLMGSTPSASAGQHRLRQIPGAMPRLHSLPPGCAFSPRCERANERCRNSPP 304

Query: 303 ILLPFGNSRQRACF 316
             L   N R  AC+
Sbjct: 305 PTLEADNGRS-ACW 317