Pairwise Alignments

Query, 324 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 330 a.a., dipeptide transport ATP-binding protein DppD from Phaeobacter inhibens DSM 17395

 Score =  306 bits (785), Expect = 3e-88
 Identities = 152/302 (50%), Positives = 209/302 (69%), Gaps = 1/302 (0%)

Query: 2   MSLLDVKDLRVEFSTQDGIVTAVNDLNFSLKQGETLGIVGESGSGKSQTVFAIMGLLAKN 61
           MSLL V+DL V+F+ +D  VTA+N ++F L +GE LGIVGESG+GKS T F++M LL++ 
Sbjct: 1   MSLLSVRDLTVKFAMRDHTVTALNQISFDLGKGERLGIVGESGAGKSITGFSLMNLLSRP 60

Query: 62  GKI-TGSAKFEGKEILNLPERELNKVRAEQIAMIFQDPMTSLNPYMKVSDQLMEVLMLHK 120
           G I +G   F  K+I+ L + E+ K+R  ++AMIFQDPM +LNP + +  Q++E L  H+
Sbjct: 61  GFIDSGQILFGDKDIVKLSDAEMRKIRGNRMAMIFQDPMVTLNPVLTIGQQMVETLKAHR 120

Query: 121 GMGKAEAFEESVRMLEAVKIPEARKRITMYPHEFSGGMRQRVMIAMALLCRPKLLIADEP 180
            + KAEA + ++  L  V IP   +R+  YPHE SGGMRQR++IAMALL  P+L+IADEP
Sbjct: 121 SLSKAEAEQIAILKLREVYIPSPEERLNQYPHELSGGMRQRIIIAMALLLDPELIIADEP 180

Query: 181 TTALDVTVQAQIMELLNELKREFNTAIIMITHDLGVVAGSCDKVLVMYAGRTMEYGSVND 240
           TTALDVT+QA IMELL EL +     +I+ITHDLGVV+   ++ LVMYAGR +E G   +
Sbjct: 181 TTALDVTIQADIMELLLELCQSNKVGLILITHDLGVVSQMTERTLVMYAGRLIEAGPTRE 240

Query: 241 IFYNPSHPYAEGLLSAIPRLDTEGEVLPTIPGNPPNLLRLPVGCPYQERCHRVTDRCKRE 300
           I  +P HPY +GL++A+P+    G+ L  IPGN P L  +P GCP+  RC    D C++ 
Sbjct: 241 IINDPQHPYTQGLINALPQQTLPGQRLKQIPGNMPGLASIPPGCPFSPRCEYAVDHCRKV 300

Query: 301 AP 302
            P
Sbjct: 301 LP 302