Pairwise Alignments

Query, 324 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 672 a.a., oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein from Marinobacter adhaerens HP15

 Score =  278 bits (710), Expect = 4e-79
 Identities = 148/318 (46%), Positives = 197/318 (61%), Gaps = 3/318 (0%)

Query: 1   MMSLLDVKDLRVEFSTQDGIVTAVNDLNFSLKQGETLGIVGESGSGKSQTVFAIMGLLAK 60
           M S+LD++DL V+  T    + AV  ++  L +GETLGIVGESGSGKS T  A+M LL  
Sbjct: 3   MASILDIQDLSVDIPTDSSTLHAVRGISLELNRGETLGIVGESGSGKSMTALALMNLLPP 62

Query: 61  NGKITGSA-KFEGKEILNLPEREL-NKVRAEQIAMIFQDPMTSLNPYMKVSDQLMEVLML 118
             K   S   F+G ++ +  EREL +K+R ++I MIFQ+PMTSLNP   +  QL E + L
Sbjct: 63  AAKRQASCIDFDGSDLTHATERELASKIRGQRIGMIFQEPMTSLNPVYSIGRQLKETMTL 122

Query: 119 HKGMGKAEAFEESVRMLEAVKIPEARKRITMYPHEFSGGMRQRVMIAMALLCRPKLLIAD 178
           H+ +   EA   +V +LE V +P+   R+  YPHE SGG RQRVMIAMAL+  P+LLIAD
Sbjct: 123 HRKVSDTEAENRAVYLLEKVGLPDPASRLKQYPHELSGGQRQRVMIAMALMNEPELLIAD 182

Query: 179 EPTTALDVTVQAQIMELLNELKREFNTAIIMITHDLGVVAGSCDKVLVMYAGRTMEYGSV 238
           EPTTALDVT+QAQI+ LL EL++EF  ++I+ITHDLGVV+ + D + VMYAG  +E G  
Sbjct: 183 EPTTALDVTIQAQILHLLRELQQEFGMSMILITHDLGVVSRAADNIAVMYAGDIVETGKT 242

Query: 239 NDIFYNPSHPYAEGLLSAIPRLDTEGEV-LPTIPGNPPNLLRLPVGCPYQERCHRVTDRC 297
            ++  NP HPY +GLL  +P    + +  L  IPG  P +     GC +  RC R    C
Sbjct: 243 GEVLENPRHPYTKGLLECVPGYKGQSQQRLGAIPGIVPAMTGDISGCAFASRCPRAAGVC 302

Query: 298 KREAPILLPFGNSRQRAC 315
           +   P        R   C
Sbjct: 303 RTTNPPTKKLHQGRYFVC 320



 Score =  199 bits (505), Expect = 2e-55
 Identities = 118/307 (38%), Positives = 174/307 (56%), Gaps = 18/307 (5%)

Query: 4   LLDVKDLRVEFSTQDGI------VTAVNDLNFSLKQGETLGIVGESGSGKSQTVFAIMGL 57
           +L V  +   FS + G+      + A++D++ +LK+GE L +VGESG GK+     IMGL
Sbjct: 352 ILTVDHVSCTFSVRRGMFGKRKPLQALDDVSLTLKKGEVLALVGESGCGKTTLTRTIMGL 411

Query: 58  LAKNGKITGSAKFEGKEILNLPERELNKVRAEQIAMIFQDPMTSLNPYMKVSDQLMEVLM 117
            A +   TGS    G+ I NLP  +    RA  I  IFQDP +SLNP   + + + + L 
Sbjct: 412 QAPS---TGSVTLNGQRIENLPPMD----RARMIQPIFQDPYSSLNPRKTIGEIIAKPLF 464

Query: 118 LHKGMGKAEAFEESVR-MLEAVKIPEARKRITMYPHEFSGGMRQRVMIAMALLCRPKLLI 176
           +H G+G  +   + VR M+E V +P   +    YP + SGG RQR  I  AL+  P+++I
Sbjct: 465 VH-GIGSNQEQHQQVRKMMELVGLPS--RVFNSYPDQLSGGQRQRAAIGRALILNPEVVI 521

Query: 177 ADEPTTALDVTVQAQIMELLNELKREFNTAIIMITHDLGVVAGSCDKVLVMYAGRTMEYG 236
            DEPT+ALDV+VQAQI+ LL +L+ E +   + +TH+L VV    D+V VMY G  +E G
Sbjct: 522 CDEPTSALDVSVQAQILNLLLDLRDELDLTYLFVTHNLSVVQHMADRVAVMYLGEIVECG 581

Query: 237 SVNDIFYNPSHPYAEGLL-SAIPRLDTEGEVLPTIPGNPPNLLRLPVGCPYQERCHRVTD 295
             + +  +P HPY   L+ SA+     E    P + G+ PN +  P GCP+  RC     
Sbjct: 582 ERDQVMSDPKHPYTHALMNSALSISPGESVPDPGLSGDFPNPMNRPSGCPFHPRCPLADQ 641

Query: 296 RCKREAP 302
           +C+ +AP
Sbjct: 642 QCREQAP 648