Pairwise Alignments

Query, 324 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 337 a.a., oligopeptide ABC transporter ATP-binding protein OppD from Klebsiella michiganensis M5al

 Score =  498 bits (1283), Expect = e-146
 Identities = 251/313 (80%), Positives = 272/313 (86%), Gaps = 1/313 (0%)

Query: 4   LLDVKDLRVEFSTQDGIVTAVNDLNFSLKQGETLGIVGESGSGKSQTVFAIMGLLAKNGK 63
           LLDVKDLRV F T DG VTAVNDLNF+L+ GETLGIVGESGSGKSQT FA+MGLLA NG+
Sbjct: 19  LLDVKDLRVTFGTPDGDVTAVNDLNFNLRAGETLGIVGESGSGKSQTAFALMGLLAANGR 78

Query: 64  ITGSAKFEGKEILNLPERELNKVRAEQIAMIFQDPMTSLNPYMKVSDQLMEVLMLHKGMG 123
           I GSA F GK+ILNLPERELNK+RAEQI+MIFQDPMTSLNPYM+V +QLMEVLMLHK + 
Sbjct: 79  IGGSATFNGKQILNLPERELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKALS 138

Query: 124 KAEAFEESVRMLEAVKIPEARKRITMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTA 183
           KAEAFEESV+ML+AVK+PEARKR+ MYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTA
Sbjct: 139 KAEAFEESVKMLDAVKMPEARKRMKMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTA 198

Query: 184 LDVTVQAQIMELLNELKREFNTAIIMITHDLGVVAGSCDKVLVMYAGRTMEYGSVNDIFY 243
           LDVTVQAQIM LLNELKREFNTAIIMITHDLGVVAG CDKVLVMYAGRTMEYG   D+FY
Sbjct: 199 LDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEYGQARDVFY 258

Query: 244 NPSHPYAEGLLSAIPRLDTEGEVLPTIPGNPPNLLRLPVGCPYQERCHRVTDRCKREAPI 303
            PSHPY+ GLL+A+PRLD EG+ L TIPGNPPNLLRLP GCP+Q RC    + C   AP 
Sbjct: 259 QPSHPYSIGLLNAVPRLDAEGDALLTIPGNPPNLLRLPKGCPFQPRCPHAMEIC-NSAPP 317

Query: 304 LLPFGNSRQRACF 316
           L  F   R RACF
Sbjct: 318 LEEFAPGRLRACF 330