Pairwise Alignments

Query, 324 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 328 a.a., putative D,D-dipeptide transport ATP-binding protein DdpD from Enterobacter sp. TBS_079

 Score =  272 bits (695), Expect = 9e-78
 Identities = 138/314 (43%), Positives = 202/314 (64%), Gaps = 3/314 (0%)

Query: 3   SLLDVKDLRVEFSTQDGIVTAVNDLNFSLKQGETLGIVGESGSGKSQTVFAIMGLLAKNG 62
           S+L ++DL + F    G V A+N ++  +K+GE +G+VGESGSGKS T    M LL +  
Sbjct: 4   SVLTIEDLHLSFPIYCGEVHALNHVSLEIKRGEIVGVVGESGSGKSVTAMLAMRLLPEGS 63

Query: 63  KIT--GSAKFEGKEILNLPERELNKVRAEQIAMIFQDPMTSLNPYMKVSDQLMEVLMLHK 120
                G     G+++L   E++L + R  ++AMIFQ+PMT+LNP  ++  Q++EV+  H+
Sbjct: 64  YRIHHGQVTLLGEDVLTASEKQLRQWRGAKVAMIFQEPMTALNPTRRIGKQMVEVIRQHQ 123

Query: 121 GMGKAEAFEESVRMLEAVKIPEARKRITMYPHEFSGGMRQRVMIAMALLCRPKLLIADEP 180
            + +  A ++++ +LE ++IP+A+  +  YP E SGGMRQRVMIA+A  C P+L+IADEP
Sbjct: 124 PLDRRAAQQKAIALLEEMQIPDAKAVMARYPFELSGGMRQRVMIALAFSCEPELIIADEP 183

Query: 181 TTALDVTVQAQIMELLNELKREFNTAIIMITHDLGVVAGSCDKVLVMYAGRTMEYGSVND 240
           TTALDVTVQ Q++ LL    R   T+++ I+HD+ VV+  CD++ VMYAG  +E G+   
Sbjct: 184 TTALDVTVQLQVLRLLKHKARASGTSVLFISHDMAVVSQLCDRMYVMYAGSVIESGATQT 243

Query: 241 IFYNPSHPYAEGLLSAIPRLDTEGEVLPTIPGNPPNLLRLPVGCPYQERCHRVTDRCKRE 300
           + ++P HPY+ GLL   P      E+LP IPG  PNL +LP GC ++ERC     +C  E
Sbjct: 244 LIHHPVHPYSIGLLQCAPENGAPRELLPAIPGTVPNLSQLPQGCAFRERCFAAGTKC-GE 302

Query: 301 APILLPFGNSRQRA 314
           AP LLP G   Q A
Sbjct: 303 APRLLPNGAEGQMA 316