Pairwise Alignments

Query, 324 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 337 a.a., Oligopeptide transport ATP-binding protein OppD from Enterobacter sp. TBS_079

 Score =  285 bits (729), Expect = 1e-81
 Identities = 153/314 (48%), Positives = 204/314 (64%), Gaps = 3/314 (0%)

Query: 4   LLDVKDLRVEFSTQDGIVTAVNDLNFSLKQGETLGIVGESGSGKSQTVFAIMGLLAKNGK 63
           +L +++L V F+     V+ ++ ++ ++  GETL +VGESG GKS T  A+MGLL  + +
Sbjct: 12  VLRLQNLNVTFAGSP--VSVLDGISLTVNAGETLALVGESGCGKSITSLALMGLLPASAQ 69

Query: 64  I-TGSAKFEGKEILNLPERELNKVRAEQIAMIFQDPMTSLNPYMKVSDQLMEVLMLHKGM 122
           I +G  +F   ++  L  RE   +R  ++AMIFQ+PMTSLNP   + DQL E +M H+ +
Sbjct: 70  IVSGEMQFRRHDLRKLSPREYADLRGSELAMIFQEPMTSLNPAFTLGDQLSEAVMRHQKL 129

Query: 123 GKAEAFEESVRMLEAVKIPEARKRITMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTT 182
            +AEA + ++++LE V+IP A  R+  YPH+ SGGMRQRVMIAMAL+  P+LLIADEPTT
Sbjct: 130 SRAEAMKVALQILEKVQIPAAEMRLKAYPHQLSGGMRQRVMIAMALINHPRLLIADEPTT 189

Query: 183 ALDVTVQAQIMELLNELKREFNTAIIMITHDLGVVAGSCDKVLVMYAGRTMEYGSVNDIF 242
           ALDVT+QAQI+ LLN LK E  TA++MITHDLGVVA    +V VMYAG+ +E GSV  IF
Sbjct: 190 ALDVTIQAQILALLNTLKEETGTAVLMITHDLGVVAEVAQQVAVMYAGQVVEQGSVEAIF 249

Query: 243 YNPSHPYAEGLLSAIPRLDTEGEVLPTIPGNPPNLLRLPVGCPYQERCHRVTDRCKREAP 302
            +P HPY  GL+ +IP L      L TIPG  P    +P GC +  RC     RC  E P
Sbjct: 250 ADPQHPYTIGLMGSIPSLGARKGALSTIPGAVPLPESMPKGCRFATRCPFAQTRCHDEKP 309

Query: 303 ILLPFGNSRQRACF 316
            L       Q ACF
Sbjct: 310 SLTAMETDHQVACF 323