Pairwise Alignments

Query, 324 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 321 a.a., oligopeptide ABC transporter, ATP-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  275 bits (702), Expect = 1e-78
 Identities = 145/312 (46%), Positives = 195/312 (62%), Gaps = 2/312 (0%)

Query: 4   LLDVKDLRVEFSTQDGIVTAVNDLNFSLKQGETLGIVGESGSGKSQTVFAIMGLLAKNGK 63
           LL+V+ L V F  + G + AV D++F+L  G TL IVGESG GKS T  A++GL+   G+
Sbjct: 5   LLEVQGLDVVFDIEAGAIHAVRDVSFTLPHGRTLCIVGESGCGKSMTALALLGLVPAPGR 64

Query: 64  ITGSA-KFEGKEILNLPERELNKVRAEQIAMIFQDPMTSLNPYMKVSDQLMEVLMLHKGM 122
           +T    +F+G ++  L E  L  +R   +AM+FQDPMTSLNP  +V DQ+ E L LH  +
Sbjct: 65  VTARRLQFDGHDLTALDENGLRALRGHHMAMVFQDPMTSLNPVFRVGDQVAEALRLHLRL 124

Query: 123 GKAEAFEESVRMLEAVKIPEARKRITMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTT 182
               A E ++ +   V IP    R   YPH+ SGGMRQRVMIAMAL C P+LLIADEPTT
Sbjct: 125 KGRAAREATIELFRQVGIPSPETRYDDYPHQLSGGMRQRVMIAMALSCGPRLLIADEPTT 184

Query: 183 ALDVTVQAQIMELLNELKREFNTAIIMITHDLGVVAGSCDKVLVMYAGRTMEYGSVNDIF 242
           ALDVT+Q QI+ LL+++      ++++ITHDLGVVA + D V+VMYAG  +E+  V ++F
Sbjct: 185 ALDVTIQGQILGLLSDIAATGRASVLLITHDLGVVAETADDVIVMYAGAIVEHAPVQELF 244

Query: 243 YNPSHPYAEGLLSAIPRLDTE-GEVLPTIPGNPPNLLRLPVGCPYQERCHRVTDRCKREA 301
            +P HPY  GL+ + P +  E    L  I GN P L  LP GC +++RC    +RC   A
Sbjct: 245 ASPLHPYTRGLMRSAPPVHGERSPRLEAIRGNVPPLDDLPSGCAFRDRCEHAFERCATAA 304

Query: 302 PILLPFGNSRQR 313
           P L   G    R
Sbjct: 305 PPLFTLGKQMVR 316