Pairwise Alignments

Query, 300 a.a., oligopeptide ABC transporter permease OppC from Vibrio cholerae E7946 ATCC 55056

Subject, 300 a.a., Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) from Pseudomonas fluorescens FW300-N2E2

 Score =  188 bits (477), Expect = 1e-52
 Identities = 99/271 (36%), Positives = 146/271 (53%), Gaps = 1/271 (0%)

Query: 31  IRFM-RNKAAMVSLFVLMLITLAVVFLPMFSAYSYEDTDWYAMHAGPSAEHWFGTDALGR 89
           +RF+ RN      L V+  + L  VF P  + +     +       PS  HWFGTD  GR
Sbjct: 29  LRFLLRNPMTFAGLIVVATLMLVAVFAPWIAGHDPLLQNLAGALQAPSGVHWFGTDEYGR 88

Query: 90  DLFVRTLVGGRISLMVGIMGALVAVLIGTLYGAASGFIGGRTDRVMMRILEILYAIPFMF 149
           D+F R + G RI+L + ++  ++   IG L G  SG+ GG  D + MRI +I  + P + 
Sbjct: 89  DVFARLVYGSRITLYIVLLVTVIVGPIGLLVGTVSGYFGGWVDSLFMRITDIFISFPSLV 148

Query: 150 LVIVLVTFFGRNIVLIFVAIGAIAWLDMARIVRGQTLSLRSKEFIEAAHVCGVSKWNIIT 209
           L +  +   G  +    +AI   AW  +AR+ R +TL LR+ +F+ A  + G S   II 
Sbjct: 149 LALAFIAALGPGLEHAVIAIALTAWPPIARLARAETLPLRNADFVVAVQLQGASSTRIIL 208

Query: 210 RHIVPNVLGIVAVYSTLLIPSMILTESFLSFLGLGVQEPMTSWGALLQEGANTMEVAIWQ 269
           RHI+P  L  V +  T+ + S+ILT + L FLGLG Q P+  WGA++  G   M  + W 
Sbjct: 209 RHIIPMCLSSVIIRLTMNMASIILTAAALGFLGLGAQAPLPEWGAMISTGRRYMLESWWL 268

Query: 270 LLFPAAFMVLTLFCFNYVGDGLRDALDPKDR 300
           +  P A ++L    FN +GDGLRD LDP+ +
Sbjct: 269 VAAPGAAIMLVSLAFNLLGDGLRDVLDPRSQ 299