Pairwise Alignments

Query, 300 a.a., oligopeptide ABC transporter permease OppC from Vibrio cholerae E7946 ATCC 55056

Subject, 285 a.a., ABC transporter permease from Azospirillum brasilense Sp245

 Score =  191 bits (486), Expect = 1e-53
 Identities = 113/282 (40%), Positives = 156/282 (55%), Gaps = 13/282 (4%)

Query: 21  QGRSLWQDARIRFMRNKAAMVSLFVLMLITLAVVFLPMFSAYSYEDTDW--YAMHAGP-- 76
           +G   W      F RNK A++ L  L LI L   F  +     Y D+ W   AM   P  
Sbjct: 6   KGSGFWS----AFARNKGAVIGLAFLTLIILMAAFADVL----YPDSPWDMTAMPFQPPL 57

Query: 77  SAEHWFGTDALGRDLFVRTLVGGRISLMVGIMGALVAVLIGTLYGAASGFIGGRTDRVMM 136
           S +   G+D LGRD+      G R+SL++G+    VAVLIG   GA SGF GGR D ++M
Sbjct: 58  SEDALLGSDTLGRDIASGIAHGARVSLLIGLTSTAVAVLIGVFLGAVSGFYGGRVDDLVM 117

Query: 137 RILEILYAIPFMFLVIVLVTFFGRNIVLIFVAIGAIAWLDMARIVRGQTLSLRSKEFIEA 196
           R  E+   IP   L +VLV  F  ++  I +AI  ++W  +AR+ RG+ +SLRS+EF+ A
Sbjct: 118 RFTELFQTIPNFVLAVVLVAIFTPSLTSIVLAIAIVSWPPLARLARGEFMSLRSREFVHA 177

Query: 197 AHVCGVSKWNIITRHIVPNVLGIVAVYSTLLIPSMILTESFLSFLGLGVQEPMTSWGALL 256
           A   G S   II R I+PN L  + V ++L++ + IL ES LSFLGLG    + SWG ++
Sbjct: 178 AVTTGQSNMTIIWRQILPNSLSPIIVSASLMVATAILLESSLSFLGLG-DPNLMSWGYMV 236

Query: 257 QEGANTMEVAIWQLLFPAAFMVLTLFCFNYVGDGLRDALDPK 298
                 +  A W   FP   ++LT+   N VG+GL DAL+PK
Sbjct: 237 GAARTVIRQAWWMSFFPGIAILLTVLALNLVGEGLNDALNPK 278