Pairwise Alignments

Query, 300 a.a., oligopeptide ABC transporter permease OppC from Vibrio cholerae E7946 ATCC 55056

Subject, 290 a.a., Binding-protein-dependent transport systems inner membrane component from Pseudomonas syringae pv. syringae B728a

 Score =  216 bits (551), Expect = 4e-61
 Identities = 110/267 (41%), Positives = 160/267 (59%)

Query: 32  RFMRNKAAMVSLFVLMLITLAVVFLPMFSAYSYEDTDWYAMHAGPSAEHWFGTDALGRDL 91
           +F+ NK A++   VL+L  LA V  P  + +     ++ A+   PS  +W GTD LGRDL
Sbjct: 23  KFLANKGAVLGAAVLLLFVLAAVLAPWIAPHDPLKANFLAVRKAPSLIYWMGTDELGRDL 82

Query: 92  FVRTLVGGRISLMVGIMGALVAVLIGTLYGAASGFIGGRTDRVMMRILEILYAIPFMFLV 151
           F R L G R SL+ G +   +A+ IG   G  +G+ GG+ D ++ +++E L + PF+ L 
Sbjct: 83  FSRLLYGARSSLLAGGVSVAIAMFIGVPLGLLAGYFGGKLDMIISQVMEALLSCPFLVLA 142

Query: 152 IVLVTFFGRNIVLIFVAIGAIAWLDMARIVRGQTLSLRSKEFIEAAHVCGVSKWNIITRH 211
           I L  F G ++    +AIG  A    AR+ RGQ LS++ ++++E A   G+    II R+
Sbjct: 143 IALGAFLGPSLTNAMIAIGLSAMPIFARLTRGQVLSIKHEDYLEGARAIGLPDRWIILRY 202

Query: 212 IVPNVLGIVAVYSTLLIPSMILTESFLSFLGLGVQEPMTSWGALLQEGANTMEVAIWQLL 271
           ++PNV+  + V +TL I S IL E+ LSFLGLG Q P  SWG++L    N ME A W  +
Sbjct: 203 VLPNVMSPLVVQATLTIASAILAEASLSFLGLGQQPPSPSWGSMLNTAKNFMEQAPWMSI 262

Query: 272 FPAAFMVLTLFCFNYVGDGLRDALDPK 298
            P   + +T+ CFN +GDGLRDALDPK
Sbjct: 263 APGVAIYITVLCFNLLGDGLRDALDPK 289