Pairwise Alignments

Query, 300 a.a., oligopeptide ABC transporter permease OppC from Vibrio cholerae E7946 ATCC 55056

Subject, 351 a.a., ABC-type dipeptide/oligopeptide/nickel transport systems permease components-like from Synechococcus elongatus PCC 7942

 Score =  185 bits (470), Expect = 1e-51
 Identities = 94/232 (40%), Positives = 138/232 (59%), Gaps = 8/232 (3%)

Query: 75  GPSAEHWFGTDALGRDLFVRTLVGGRISLMVGIMGALVAVLIGTLYGAASGFIGGRTDRV 134
           GP   H  GTD  GRD F R L G RISL VG++G ++   +G L G  +G+ GG  D +
Sbjct: 119 GPGKLHLLGTDDQGRDQFSRLLYGSRISLSVGLVGVILTFPLGILVGGIAGYWGGWVDAL 178

Query: 135 MMRILEILYAIPFMFLVIVLVTFF------GRNIVLIFVAIGAIAWLDMARIVRGQTLSL 188
           +MR++E+L  IP ++L++ L              +LI      I W  +AR++RGQ LSL
Sbjct: 179 IMRLVEVLMTIPSLYLLVALAAVLPPGLSSAERFLLIVAITSLINWAGLARVIRGQVLSL 238

Query: 189 RSKEFIEAAHVCGVSKWNIITRHIVPNVLGIVAVYSTLLIPSMILTESFLSFLGLGVQEP 248
           R +E+++A+ V G S+  ++ RHI+P  L  V + +TL +PS I+ ES LS +GLG+Q+P
Sbjct: 239 REREYVQASQVMGASRLYLLIRHILPQTLTYVIIAATLAVPSFIVAESVLSLVGLGIQQP 298

Query: 249 MTSWGALLQEGANTMEVAI--WQLLFPAAFMVLTLFCFNYVGDGLRDALDPK 298
             SWG +L    N   + +  W +  PA  +V+ +  FN VGDGLRD LDP+
Sbjct: 299 DPSWGNMLSLATNASMLLLNPWLIWPPALLIVVAVLAFNVVGDGLRDRLDPR 350