Pairwise Alignments

Query, 300 a.a., oligopeptide ABC transporter permease OppC from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., peptide transport system permease ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  184 bits (466), Expect = 3e-51
 Identities = 93/271 (34%), Positives = 151/271 (55%), Gaps = 5/271 (1%)

Query: 32  RFMRNKAAMVSLFVLMLITLAVVFLPMFSAYS-----YEDTDWYAMHAGPSAEHWFGTDA 86
           R +    A++ L V++++  A    P    Y      +E          P+++ W GTD 
Sbjct: 22  RLLHRPLALIGLAVIIVVVGAAALAPWVVPYDPHEQFFEGLTIEGAPLPPNSQFWLGTDL 81

Query: 87  LGRDLFVRTLVGGRISLMVGIMGALVAVLIGTLYGAASGFIGGRTDRVMMRILEILYAIP 146
           +GRDL  R + G R SL++G++   +AV+IG+L G A+G+  G  D V+MR  +++ A P
Sbjct: 82  VGRDLLSRLIYGARTSLVIGVVANGIAVVIGSLVGIAAGYFRGWVDTVLMRFTDLMMAFP 141

Query: 147 FMFLVIVLVTFFGRNIVLIFVAIGAIAWLDMARIVRGQTLSLRSKEFIEAAHVCGVSKWN 206
            + L IVL   F  ++ ++ + I  + W+ +AR+V  +T S+  ++F+ A    G     
Sbjct: 142 ALLLAIVLAAIFTPSLWIVAMVIAMVNWVQIARVVYTETRSIAERDFVTAERAMGAGAGR 201

Query: 207 IITRHIVPNVLGIVAVYSTLLIPSMILTESFLSFLGLGVQEPMTSWGALLQEGANTMEVA 266
           I+ RHI+P++L  + V++TL I + +L E+ LSFLG+GVQ P+ SWG ++ E       A
Sbjct: 202 ILFRHILPHLLSTIIVWATLGIATTVLLEATLSFLGIGVQPPIPSWGNIIFENQTYFTSA 261

Query: 267 IWQLLFPAAFMVLTLFCFNYVGDGLRDALDP 297
            W +  P A ++     FN VGD LRD LDP
Sbjct: 262 PWLVFIPGAAILALALAFNLVGDALRDVLDP 292