Pairwise Alignments

Query, 300 a.a., oligopeptide ABC transporter permease OppC from Vibrio cholerae E7946 ATCC 55056

Subject, 272 a.a., peptide ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  175 bits (444), Expect = 9e-49
 Identities = 105/259 (40%), Positives = 141/259 (54%), Gaps = 4/259 (1%)

Query: 43  LFVLMLITLAV-VFLPMFSAYSYEDTDWYAMHAGPSAEHWFGTDALGRDLFVRTLVGGRI 101
           L  ++L+T AV +F   F       T   A  A P   H  GTD  GRD+  R +VG R 
Sbjct: 14  LIAILLVTAAVGLFWTPFDPMKLSFT---ARLAAPGPAHLLGTDEFGRDVLSRLMVGARA 70

Query: 102 SLMVGIMGALVAVLIGTLYGAASGFIGGRTDRVMMRILEILYAIPFMFLVIVLVTFFGRN 161
           S+ +G++    A + GTL G  SG+  G  D V+M +   L A P + L + L+  FG N
Sbjct: 71  SVWIGVLTVGFATVCGTLIGLISGYARGWVDGVIMAVNNALLAFPGILLALGLLAVFGAN 130

Query: 162 IVLIFVAIGAIAWLDMARIVRGQTLSLRSKEFIEAAHVCGVSKWNIITRHIVPNVLGIVA 221
              I  A+G      MAR+VRG  LSLR +EFIEA+ V G  +   + RHI+PN +  + 
Sbjct: 131 QYGIIFALGIAYTPSMARVVRGAVLSLREREFIEASRVMGNGELYTMLRHILPNCVAPIT 190

Query: 222 VYSTLLIPSMILTESFLSFLGLGVQEPMTSWGALLQEGANTMEVAIWQLLFPAAFMVLTL 281
           V +T +    IL+ES LSFLGLGV  P  +WG +L  G   ++ A W  LFP   + LTL
Sbjct: 191 VLATSMFGWAILSESALSFLGLGVPPPAPTWGNMLAAGRPFLQQAAWLGLFPGLCIALTL 250

Query: 282 FCFNYVGDGLRDALDPKDR 300
              N +GD LRD LDP+ R
Sbjct: 251 LGINLLGDALRDRLDPRMR 269