Pairwise Alignments

Query, 300 a.a., oligopeptide ABC transporter permease OppC from Vibrio cholerae E7946 ATCC 55056

Subject, 319 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  171 bits (434), Expect = 2e-47
 Identities = 93/282 (32%), Positives = 150/282 (53%), Gaps = 14/282 (4%)

Query: 25  LWQDARIRFMRNKAAMVSLFVLMLITLAVVFLPMFSAYSYEDTDWYAMHAGP------SA 78
           LW D        K A + L +++LI    +F P+ + Y        A    P      + 
Sbjct: 25  LWHD--------KTAAIGLALILLIVFLALFAPLIAPYDPAAQSIMARLKPPVWMERGTW 76

Query: 79  EHWFGTDALGRDLFVRTLVGGRISLMVGIMGALVAVLIGTLYGAASGFIGGRTDRVMMRI 138
           EH  GTD LGRD+  R + G R +L +G +  L+A  +GT+ G  +GF+GGRTD ++MR+
Sbjct: 77  EHLLGTDNLGRDVLSRIIWGARATLTIGAVTCLLAATLGTVIGLWAGFMGGRTDSILMRL 136

Query: 139 LEILYAIPFMFLVIVLVTFFGRNIVLIFVAIGAIAWLDMARIVRGQTLSLRSKEFIEAAH 198
           ++I  + P + L++++V   G  +  +   +    W+  AR+VRG   S R   ++EAA 
Sbjct: 137 VDIQVSFPGILLILLVVAVLGPGVWTLVAVLSVTNWMVYARLVRGIVSSTRQTPYVEAAE 196

Query: 199 VCGVSKWNIITRHIVPNVLGIVAVYSTLLIPSMILTESFLSFLGLGVQEPMTSWGALLQE 258
           V G     +I RHI+PN++  +   + L   +++L E+ +SFLG GVQ P TSWG  +  
Sbjct: 197 VIGCRPARVIFRHILPNIVSPLMTLAILEFTNIVLAEAAVSFLGFGVQPPATSWGLDVAS 256

Query: 259 GANTMEVAIWQLLFPAAFMVLTLFCFNYVGDGLRDALDPKDR 300
           G + + +A W + FP   +V T+   N   + LR   DP++R
Sbjct: 257 GRDYLFIAWWLVTFPGLAIVATVLSINLFANWLRVTTDPEER 298