Pairwise Alignments

Query, 300 a.a., oligopeptide ABC transporter permease OppC from Vibrio cholerae E7946 ATCC 55056

Subject, 376 a.a., oligopeptide uptake ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  299 bits (766), Expect = 6e-86
 Identities = 139/219 (63%), Positives = 181/219 (82%)

Query: 82  FGTDALGRDLFVRTLVGGRISLMVGIMGALVAVLIGTLYGAASGFIGGRTDRVMMRILEI 141
           FGTD+ GRDL VR ++GG+IS+ VG++ +LV++ IG +YGA SG+IGGR D VMMR++EI
Sbjct: 158 FGTDSNGRDLLVRVMLGGQISIAVGLLASLVSLGIGVVYGATSGYIGGRVDNVMMRLVEI 217

Query: 142 LYAIPFMFLVIVLVTFFGRNIVLIFVAIGAIAWLDMARIVRGQTLSLRSKEFIEAAHVCG 201
           LY++PF+FLV+VLV FFGR+ +LIF+ IGA+ WLDMARIVRGQTL+L+ +EF+ AA   G
Sbjct: 218 LYSLPFVFLVVVLVVFFGRSFILIFLVIGAVEWLDMARIVRGQTLALKRREFVGAAQALG 277

Query: 202 VSKWNIITRHIVPNVLGIVAVYSTLLIPSMILTESFLSFLGLGVQEPMTSWGALLQEGAN 261
           ++ W II RHI+PN +G V V+ T+++P +IL ESFLSFLGLGVQ P+TSWGAL+ EGAN
Sbjct: 278 LTDWQIIRRHIIPNTIGPVIVFVTVVVPKVILLESFLSFLGLGVQAPLTSWGALISEGAN 337

Query: 262 TMEVAIWQLLFPAAFMVLTLFCFNYVGDGLRDALDPKDR 300
            ++ A W L+FPA F V+TLF  N+VGDGLRDALDPKDR
Sbjct: 338 NIQSAPWLLIFPAIFFVVTLFSLNFVGDGLRDALDPKDR 376



 Score = 47.0 bits (110), Expect = 7e-10
 Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 1/85 (1%)

Query: 19  EIQGRSLWQDARIRFMRNKAAMVSLFVLMLITLAVVFLPMFSAYSYEDTDWYAMHAGPSA 78
           E +GRSL+Q A +RF RN+ AM    +L+LI L     P+FS +SY+      +  GPS 
Sbjct: 13  ETKGRSLFQLATLRFRRNRPAMAGCVMLVLIALFSFVGPLFSPHSYDQVFPSYVTIGPSL 72

Query: 79  EHWFGTDALGRDLFVRTLVGGRISL 103
           E    T  L +D+        R++L
Sbjct: 73  EPRPDTSTL-QDVMEGVATRARVTL 96