Pairwise Alignments

Query, 300 a.a., oligopeptide ABC transporter permease OppC from Vibrio cholerae E7946 ATCC 55056

Subject, 314 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

 Score =  169 bits (429), Expect = 6e-47
 Identities = 92/227 (40%), Positives = 135/227 (59%), Gaps = 3/227 (1%)

Query: 74  AGPSAEHWF--GTDALGRDLFVRTLVGGRISLMVGIMGALVAVLIGTLYGAASGFIGGRT 131
           AG S +H+F  G+D+LGRD++ R L G R+S+ VGI  ALVA++ G   G A+G+   R 
Sbjct: 83  AGDSFDHFFLMGSDSLGRDIWSRALFGARVSITVGISVALVALVFGMTVGMAAGYFR-RL 141

Query: 132 DRVMMRILEILYAIPFMFLVIVLVTFFGRNIVLIFVAIGAIAWLDMARIVRGQTLSLRSK 191
           D V+MRI++ + AIP +   I LV  FG  +  +  AI       + R+VR   L++R +
Sbjct: 142 DTVVMRIMDGVMAIPGILFAISLVALFGGTLPTVIAAIAIPEIPRVGRLVRSVVLTIREE 201

Query: 192 EFIEAAHVCGVSKWNIITRHIVPNVLGIVAVYSTLLIPSMILTESFLSFLGLGVQEPMTS 251
            ++EAA       W I+ RHI+PN +  + +  T +  S IL E+ LSFLG+G+   M +
Sbjct: 202 PYVEAAIALDTPTWKILLRHIMPNAVAPLIIQGTYVCASAILIEAILSFLGVGLPADMAT 261

Query: 252 WGALLQEGANTMEVAIWQLLFPAAFMVLTLFCFNYVGDGLRDALDPK 298
           WG ++ EG +        +LFP  F+VLT+   N +GDGLRD LDPK
Sbjct: 262 WGNIMAEGRSQFNQYPHNVLFPGIFLVLTVLSVNILGDGLRDTLDPK 308