Pairwise Alignments

Query, 300 a.a., oligopeptide ABC transporter permease OppC from Vibrio cholerae E7946 ATCC 55056

Subject, 300 a.a., putative D,D-dipeptide transport system permease protein from Phaeobacter inhibens DSM 17395

 Score =  180 bits (456), Expect = 4e-50
 Identities = 94/268 (35%), Positives = 146/268 (54%)

Query: 31  IRFMRNKAAMVSLFVLMLITLAVVFLPMFSAYSYEDTDWYAMHAGPSAEHWFGTDALGRD 90
           +  MRN  A++   ++ ++ LA  F P  +  S    D  +    PS  +W GTD LGRD
Sbjct: 28  LALMRNPLAVLGAVIITILILAAAFAPWIAPQSPVGQDLSSRLLPPSWANWMGTDELGRD 87

Query: 91  LFVRTLVGGRISLMVGIMGALVAVLIGTLYGAASGFIGGRTDRVMMRILEILYAIPFMFL 150
           +F R + G RI+LM+  + A+++  +G + GA +G+ GG  DR++M I ++  ++P + L
Sbjct: 88  IFSRVVYGARITLMIVALVAVISAPLGLIIGAIAGYFGGWVDRILMGITDVFLSMPKLIL 147

Query: 151 VIVLVTFFGRNIVLIFVAIGAIAWLDMARIVRGQTLSLRSKEFIEAAHVCGVSKWNIITR 210
            +  V   G  I    +AI   AW   ARI R +TL+ R+ EFI A  + G S   +I +
Sbjct: 148 ALAFVAALGPGIENAIIAIAITAWPAYARIARAETLTFRNAEFIAATRLLGASHSRVILQ 207

Query: 211 HIVPNVLGIVAVYSTLLIPSMILTESFLSFLGLGVQEPMTSWGALLQEGANTMEVAIWQL 270
           H++P     + V  TL +  +ILT + L FLGLG Q P+  WGA++  G   +    W  
Sbjct: 208 HVLPLCTSSMIVRVTLDMAGIILTAAGLGFLGLGAQPPLPEWGAMISRGRVFILDQWWVA 267

Query: 271 LFPAAFMVLTLFCFNYVGDGLRDALDPK 298
             P   +++    F ++GDGLRD LDPK
Sbjct: 268 TMPGIAIIVVSLGFCFLGDGLRDVLDPK 295