Pairwise Alignments

Query, 300 a.a., oligopeptide ABC transporter permease OppC from Vibrio cholerae E7946 ATCC 55056

Subject, 266 a.a., Probable dipeptide-transport integral membrane protein ABC transporter DppC from Mycobacterium tuberculosis H37Rv

 Score =  167 bits (423), Expect = 2e-46
 Identities = 87/262 (33%), Positives = 142/262 (54%), Gaps = 1/262 (0%)

Query: 40  MVSLFVLMLITLAVVFLPMFSAYSYEDTDWYAMHAGPSAEHWFGTDALGRDLFVRTLVGG 99
           +++  +++LI +   F  +F+A      D       PSA HWFGTD  G D++ RT+ G 
Sbjct: 1   VIAAALILLILVVAAFPSLFTAADPTYADPSQSMLAPSAAHWFGTDLQGHDIYSRTVYGA 60

Query: 100 RISLMVGIMGALVAVLIGTLYGAASGFIGGRTDRVMMRILEILYAIPFMFLVIVLVTFFG 159
           R S+ VG+   L   ++G   GA +GF G   D V+ R+ ++   +P +   IVL+    
Sbjct: 61  RASVTVGLGATLAVFVVGGALGALAGFYGSWIDAVVSRVTDVFLGLPLLLAAIVLMQVMH 120

Query: 160 RNIVLIFVAIGAI-AWLDMARIVRGQTLSLRSKEFIEAAHVCGVSKWNIITRHIVPNVLG 218
              V   +AI A+  W  +ARI RG  L +R+ +++ AA   G++++ I+ RH +PN +G
Sbjct: 121 HRTVWTVIAILALFGWPQVARIARGAVLEVRASDYVLAAKALGLNRFQILLRHALPNAVG 180

Query: 219 IVAVYSTLLIPSMILTESFLSFLGLGVQEPMTSWGALLQEGANTMEVAIWQLLFPAAFMV 278
            V   +T+ +   I+TE+ LS+LG+G+   + SWG  +      +      L +PA  + 
Sbjct: 181 PVIAVATVALGIFIVTEATLSYLGVGLPTSVVSWGGDINVAQTRLRSGSPILFYPAGALA 240

Query: 279 LTLFCFNYVGDGLRDALDPKDR 300
           +T+  F  +GD LRDALDP  R
Sbjct: 241 ITVLAFMMMGDALRDALDPASR 262