Pairwise Alignments

Query, 300 a.a., oligopeptide ABC transporter permease OppC from Vibrio cholerae E7946 ATCC 55056

Subject, 315 a.a., peptide ABC transporter permease from Klebsiella michiganensis M5al

 Score =  198 bits (504), Expect = 1e-55
 Identities = 106/285 (37%), Positives = 171/285 (60%), Gaps = 11/285 (3%)

Query: 24  SLWQDARIRFMRNKAAMVSLFVLMLITLAVVFLPMFSAYSYEDTDWYAMHAGPSAEHWFG 83
           S W+ A     RN+ AM+ L +L ++ L  V  P++S +  + TD    +  P A HW G
Sbjct: 26  SPWRQAWRALRRNRLAMLCLLLLTVMALWCVLGPLWSPWQDDATDALMNNKPPGAAHWLG 85

Query: 84  TDALGRDLFVRTLVGGRISLMVGIMGALVAVLIGTLYGAASGFIGGRTDRVMMRILEILY 143
           TD LGRD++ R L+ GRISL++G++  L++V +G L GA SG+ GG TD+++MR  +++ 
Sbjct: 86  TDFLGRDIYTRLLLAGRISLIIGLLTMLLSVALGYLLGALSGYAGGLTDKLIMRFADLVM 145

Query: 144 AIPFMFLVIVLVTFFGR-------NIVLIFVAIGAIAWLDMARIVRGQTLSLRSKEFIEA 196
            IP + L+IV               I ++ + +  + W  +AR+VRGQ LSLR ++F+ A
Sbjct: 146 TIPGLPLLIVAGAMLSELDFSPDSRIYMVVIMLSLLEWPKLARLVRGQCLSLRERDFMLA 205

Query: 197 AHVCGVSKWNIITRHIVPNVLGIVAVYSTLLIPSMILTESFLSFLGLGVQEPMTSWGALL 256
             + G+S    +  H++PN + I+ V +T+ + + IL+ES LS+LGLGV  P  SWG ++
Sbjct: 206 TQILGLSARRRLFGHLLPNTVPILVVMATMAVANAILSESALSYLGLGVVPPTPSWGNMM 265

Query: 257 QEGANTM---EVAIWQLLFPAAFMVLTLFCFNYVGDGLRDALDPK 298
            + AN++   +   W  + P   + +T+   N +GDGLRDA+DPK
Sbjct: 266 -DAANSLIDFQRRPWLWMPPGIAIFITVIAINVLGDGLRDAMDPK 309