Pairwise Alignments

Query, 300 a.a., oligopeptide ABC transporter permease OppC from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., putative D,D-dipeptide transport system permease protein DdpC from Enterobacter sp. TBS_079

 Score =  189 bits (479), Expect = 9e-53
 Identities = 101/272 (37%), Positives = 157/272 (57%), Gaps = 2/272 (0%)

Query: 29  ARIRFMRNKA--AMVSLFVLMLITLAVVFLPMFSAYSYEDTDWYAMHAGPSAEHWFGTDA 86
           A++ +M  K+   ++   +++L+ L +V  P    +     D  A    PSAEHWFGTD 
Sbjct: 21  AKLFWMLRKSPLTLIGAAIMILMLLLMVTSPWIVPHDPNALDLTARLQAPSAEHWFGTDE 80

Query: 87  LGRDLFVRTLVGGRISLMVGIMGALVAVLIGTLYGAASGFIGGRTDRVMMRILEILYAIP 146
           +GRDLF R L G + S+  G+   ++A  IG+L G  SG +GGR D ++MRI++++ +IP
Sbjct: 81  VGRDLFSRVLAGSQQSISAGLAVVVIAGGIGSLLGCLSGVMGGRGDAIIMRIMDVMLSIP 140

Query: 147 FMFLVIVLVTFFGRNIVLIFVAIGAIAWLDMARIVRGQTLSLRSKEFIEAAHVCGVSKWN 206
            + L + L    G ++    +AI  +      R+ RGQTL +R   +++AA   G S+W+
Sbjct: 141 SLVLTMALAAALGPSLFNAMLAIAIVRIPFYVRLARGQTLVVRQFTYVQAARTFGASRWH 200

Query: 207 IITRHIVPNVLGIVAVYSTLLIPSMILTESFLSFLGLGVQEPMTSWGALLQEGANTMEVA 266
           +I+ HI+ N L  + V ++L I S IL  + L F+GLG Q+P   WGA++  G N +   
Sbjct: 201 LISWHILRNALPPLIVQASLDIGSAILMAATLGFIGLGAQQPTAEWGAMVAVGRNYVLDQ 260

Query: 267 IWQLLFPAAFMVLTLFCFNYVGDGLRDALDPK 298
            W   FP A +++T   FN  GDG+RD LDPK
Sbjct: 261 WWYCAFPGAAILITAVGFNLFGDGIRDLLDPK 292