Pairwise Alignments

Query, 300 a.a., oligopeptide ABC transporter permease OppC from Vibrio cholerae E7946 ATCC 55056

Subject, 300 a.a., oligopeptide ABC transporter, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  209 bits (531), Expect = 8e-59
 Identities = 106/266 (39%), Positives = 158/266 (59%)

Query: 33  FMRNKAAMVSLFVLMLITLAVVFLPMFSAYSYEDTDWYAMHAGPSAEHWFGTDALGRDLF 92
           + RN    +   ++  ++L  +  P  + Y         + +GPSA H  GTDALGRD+ 
Sbjct: 32  WQRNILFAIGFAIVGSMSLLALLAPWIAPYDPTALHLDTILSGPSATHLLGTDALGRDVL 91

Query: 93  VRTLVGGRISLMVGIMGALVAVLIGTLYGAASGFIGGRTDRVMMRILEILYAIPFMFLVI 152
            R L G R+SL VG +   +AV IG   G  +G+ GG  D + MR+++I+   P  FL++
Sbjct: 92  SRLLYGARVSLWVGFVSVGIAVAIGLAVGLVAGYFGGIIDELAMRLVDIMLCFPSFFLIL 151

Query: 153 VLVTFFGRNIVLIFVAIGAIAWLDMARIVRGQTLSLRSKEFIEAAHVCGVSKWNIITRHI 212
            ++ F   ++  I   IG  +W+ +AR+VR +TLSLR +EF+ AA + G  +  II  HI
Sbjct: 152 AVIAFLEPSLGNIMAVIGLTSWMGVARLVRAETLSLREREFVAAARLAGAGRTRIILTHI 211

Query: 213 VPNVLGIVAVYSTLLIPSMILTESFLSFLGLGVQEPMTSWGALLQEGANTMEVAIWQLLF 272
           +PN +  V V +TL +   ILTES LSFLGLGVQ P  SWG +L EG + +E+A W  LF
Sbjct: 212 LPNAMAPVLVSATLGVAGAILTESALSFLGLGVQPPDPSWGNMLLEGKDVLEIAPWMSLF 271

Query: 273 PAAFMVLTLFCFNYVGDGLRDALDPK 298
           P   +++T+  +N +G+ LRD LDP+
Sbjct: 272 PGLAILVTVLGYNLLGESLRDFLDPR 297