Pairwise Alignments

Query, 306 a.a., oligopeptide ABC transporter permease OppB from Vibrio cholerae E7946 ATCC 55056

Subject, 306 a.a., peptide transport system permease ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  206 bits (524), Expect = 6e-58
 Identities = 111/307 (36%), Positives = 183/307 (59%), Gaps = 5/307 (1%)

Query: 1   MLKFIAKRIFEAIPTMLVLITISFFLMRYAPGNPFS--SERPLPPEVMANINAKYGLDKP 58
           M  +IA+R+ + +  +L +  ++F L+   P +P    + R    + + NI  + GL+ P
Sbjct: 1   MAAYIARRLLQTVVILLGISFVTFVLLYLIPADPARQIAGRSATAQTVENIREQLGLNLP 60

Query: 59  VSEQYLTYLTNIVQGDFGPSFKYKDYTVNELIASALPVSVKIGLAAFVFTVIMGVTVGTI 118
             EQYL Y+T +VQGDFG S+  K   V  LIAS LP S+ +   A    +I G+T+G +
Sbjct: 61  FYEQYLRYVTGLVQGDFGRSYLQKT-EVATLIASRLPASLVLMAGAITCELIFGLTMGIV 119

Query: 119 AALKQNTWIDYTIMSTAMLGVVMPSFVLAPVLIYIFAIQFSLFPAGGWQDGGFEYMALPV 178
           AAL++ +  D T+M  + +GV  P FV+  +L+Y+FA++   FP GG+  G F ++ LP 
Sbjct: 120 AALRRGSRTDDTLMIASFVGVSAPQFVIGILLLYVFAVKLGWFPIGGY--GTFAHLVLPS 177

Query: 179 LGMSLLYVATFARITRGSMIETLNSNFIRTARAKGLSYGYIVVKHALKPALLPVVSYMGP 238
           + +  L    ++R+ R S+IE +  +FIRTARA G     ++ +HA+  A+LPV++ +G 
Sbjct: 178 VTLGFLGAGWYSRMMRSSLIEVMRQDFIRTARATGAGRAKVLFRHAMPNAILPVIAMIGI 237

Query: 239 AFVGIITGSVVIETIFGLPGIGKLFVNAAFNRDYSLVMGVTILIGFLFILFNAIVDILLA 298
                ++G VV+E++FG PGIG+L   A    D  ++MGVT++  F  +L N + D++  
Sbjct: 238 DIGLFMSGIVVVESVFGWPGIGQLAWQAIQRVDIPIIMGVTLVSAFAIVLGNLLADLITP 297

Query: 299 YIDPKIR 305
            IDP+I+
Sbjct: 298 LIDPRIK 304