Pairwise Alignments

Query, 306 a.a., oligopeptide ABC transporter permease OppB from Vibrio cholerae E7946 ATCC 55056

Subject, 308 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  193 bits (491), Expect = 4e-54
 Identities = 102/310 (32%), Positives = 185/310 (59%), Gaps = 12/310 (3%)

Query: 1   MLKFIAKRIFEAIPTMLVLITISFFLMRYAPGNPFSSER--PLPPEVMANINAKYGLDKP 58
           M++F+  R+  A+ T+L ++T +F ++R + G+P        +P + +      +GLD+P
Sbjct: 1   MIRFVLVRLMRAVITILAVVTFAFVVLRMS-GDPAQVMLGPDVPQDAVDAFRKTWGLDQP 59

Query: 59  VSEQYLTYLTNIVQGDFGPSFKYKDYTVNELIASALPVSVKIGLAAFVFTVIMGVTVGTI 118
           +  QYL Y+ +I  GDFG S + K   ++ L+   +P ++++ L A +  +++G+  G  
Sbjct: 60  IWIQYLAYIKSIFTGDFGVSMRDKASALH-LVLERVPATLQLTLPALILKLMIGIPAGVY 118

Query: 119 AALKQNTWIDYTIMSTAMLGVVMPSFVLAPVLIYIFAIQFSLFPAGG---WQDGGFEYMA 175
           AAL + ++ D  +++ A++G  +PSFV+  VL+ IF++   + P+GG   W  G      
Sbjct: 119 AALHRQSFADRGVITLAIIGFTVPSFVMGLVLVLIFSVLLGVLPSGGQDTWMHG-----I 173

Query: 176 LPVLGMSLLYVATFARITRGSMIETLNSNFIRTARAKGLSYGYIVVKHALKPALLPVVSY 235
           LP + MS+  +   AR +R +MIE L   +IRTA AKGL +  ++  HAL  A +P+V+ 
Sbjct: 174 LPTITMSIGGIGILARFSRSAMIEVLGQPYIRTASAKGLKWRDVIWSHALPNAAVPIVTI 233

Query: 236 MGPAFVGIITGSVVIETIFGLPGIGKLFVNAAFNRDYSLVMGVTILIGFLFILFNAIVDI 295
           +G     +I G+VV+E+IF  PGIG+L + +  NRD ++V  + ++I    ++ N +VD+
Sbjct: 234 VGFMVGSLIAGAVVVESIFSWPGIGRLLIVSVSNRDLAVVQCILLIIAAAMVMSNLVVDL 293

Query: 296 LLAYIDPKIR 305
           L  ++DP++R
Sbjct: 294 LYGWLDPRLR 303