Pairwise Alignments

Query, 306 a.a., oligopeptide ABC transporter permease OppB from Vibrio cholerae E7946 ATCC 55056

Subject, 315 a.a., peptide ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  186 bits (471), Expect = 8e-52
 Identities = 104/315 (33%), Positives = 176/315 (55%), Gaps = 11/315 (3%)

Query: 1   MLKFIAKRIFEAIPTMLVLITISFFLMRYAPGNPFSS--ERPLPPEVMANINAKYGLDKP 58
           M  ++ KR+   +P +  L  I F +M   PG+  ++       PE +  IN   GLDKP
Sbjct: 1   MQAYVLKRLVAVVPVLFGLSIIVFLVMGLIPGDTATAILGSYATPENVERINRDLGLDKP 60

Query: 59  VSEQYLTYLTNIVQGDFGPSFKYKDYTVNELIASALPVSVKIGLAAFVFTVIMGVTVGTI 118
           + +QY  ++ N++QGDFG SF      ++E++       V  G++  + +VI G+  G +
Sbjct: 61  LVQQYAIWIGNVLQGDFGRSFALNRPVLDEVLERFQATLVLAGVSLVLCSVI-GLLAGVV 119

Query: 119 AALKQNTWIDYTIMSTAMLGVVMPSFVLAPVLIYIFAIQFSLFPAGG----WQDGGFE-- 172
           +A++Q  W D  I    + G+  PSF L  +LIY+FA+ + + PA G    +  G  +  
Sbjct: 120 SAVRQFGWADRVITFFVLAGISTPSFWLGLLLIYLFAVHWRILPASGMYAVYGRGDLKDL 179

Query: 173 --YMALPVLGMSLLYVATFARITRGSMIETLNSNFIRTARAKGLSYGYIVVKHALKPALL 230
             ++ LP   ++++     AR+TRG+M+E L  +++RTARAKGL    ++  HA + AL+
Sbjct: 180 LLHLILPAATLAVVAAGVIARLTRGAMLEVLRQDYVRTARAKGLPERRVIYAHAFRAALV 239

Query: 231 PVVSYMGPAFVGIITGSVVIETIFGLPGIGKLFVNAAFNRDYSLVMGVTILIGFLFILFN 290
            VV  +G     ++ G+V +ET+F  PGIG + V A   RD  LV G  +++   ++LFN
Sbjct: 240 SVVPAIGIQAGFVLGGAVYVETVFQWPGIGAMLVKAISTRDILLVQGGVLVVAASYVLFN 299

Query: 291 AIVDILLAYIDPKIR 305
            + D++ + +DP+IR
Sbjct: 300 LLADVVQSMLDPRIR 314