Pairwise Alignments

Query, 306 a.a., oligopeptide ABC transporter permease OppB from Vibrio cholerae E7946 ATCC 55056

Subject, 319 a.a., peptide ABC transporter permease from Klebsiella michiganensis M5al

 Score =  197 bits (502), Expect = 2e-55
 Identities = 112/317 (35%), Positives = 177/317 (55%), Gaps = 13/317 (4%)

Query: 1   MLKFIAKRIFEAIPTMLVLITISFFLMRYAPGNPFSSERPLPPEVMANINAKYGLDKPVS 60
           M  FI +R+ + +P +L+   I F L    PG+       L     A + A YGLD+P+ 
Sbjct: 1   MRNFILRRLLQTLPMLLLASFIIFMLFAKTPGDFIDGNITLTAARAAELKAIYGLDQPLL 60

Query: 61  EQYLTYLTNIVQGDFGPSFKYKDYTVNELIASALPVSVKIGLAAFVFTVIMGVTVGTIAA 120
            +YL +L  +++GD G S +Y+   V++L+   +  S  +   A VF   +G+TVG I+A
Sbjct: 61  TRYLHWLGQLLRGDLGFSLQYQ-IPVSQLLNQYIWNSFLLASVALVFYWGIGLTVGVISA 119

Query: 121 LKQNTWIDYTIMSTAMLGVVMPSFVLAPVLIYIFAIQFSLFPAGGW-----QDGGFEY-- 173
           LK N+  D+ +       +  P+F L  +LI  FA+     P GG       D G+EY  
Sbjct: 120 LKPNSAFDHLVSVAVFAAMSFPTFFLCLLLIKWFAVDLHWLPVGGMTNTGSDDSGWEYVL 179

Query: 174 -----MALPVLGMSLLYVATFARITRGSMIETLNSNFIRTARAKGLSYGYIVVKHALKPA 228
                +ALPVL + +L   +  R  R SM+E +  +FIRTARAKGL    +++KHAL+ A
Sbjct: 180 QVAAHLALPVLALVMLQAGSLTRYFRASMLEVVKMDFIRTARAKGLRERTVILKHALRNA 239

Query: 229 LLPVVSYMGPAFVGIITGSVVIETIFGLPGIGKLFVNAAFNRDYSLVMGVTILIGFLFIL 288
           LLP+++ +G    G+ +G+++ E +F  PG G + +++   RDY ++MG T+ +  L IL
Sbjct: 240 LLPIITLLGFELPGLFSGAIITEKVFNWPGAGHIHIDSLAARDYPVLMGFTLFLAVLTIL 299

Query: 289 FNAIVDILLAYIDPKIR 305
            N I D+L A+ DP+IR
Sbjct: 300 GNLIADVLYAWADPRIR 316