Pairwise Alignments

Query, 306 a.a., oligopeptide ABC transporter permease OppB from Vibrio cholerae E7946 ATCC 55056

Subject, 313 a.a., peptide ABC transporter from Cupriavidus basilensis FW507-4G11

 Score =  195 bits (496), Expect = 1e-54
 Identities = 99/315 (31%), Positives = 182/315 (57%), Gaps = 11/315 (3%)

Query: 1   MLKFIAKRIFEAIPTMLVLITISFFLMRYAPGNPFSS---ERPLPPEVMANINAKYGLDK 57
           M  F+ +R+   +P ++++  I F ++R  PG+P ++   +     ++ A I  + GLD+
Sbjct: 1   MAFFVLRRLIATLPVLVIVAFIVFLMLRLTPGDPAAAIVGDAGTAADI-ARIRLQLGLDQ 59

Query: 58  PVSEQYLTYLTNIVQGDFGPSFKYKDYTVNELIASALPVSVKIGLAAFVFTVIMGVTVGT 117
            ++ Q+L +   +V GD G SF Y   +V+ELIA  L  +V +        V++ V +G 
Sbjct: 60  SLAHQFLAWAARLVHGDLGESF-YLKRSVSELIAQRLEPTVALAGVTITLAVLIAVPLGV 118

Query: 118 IAALKQNTWIDYTIMSTAMLGVVMPSFVLAPVLIYIFAIQFSLFPAGGWQ------DGGF 171
           +AA +   W+D  +MS ++LG  +P FV+  ++I+ F+++    P  G+           
Sbjct: 119 LAAWRHGGWLDRCLMSFSVLGFSIPVFVVGYLMIWGFSLKLGWLPVQGYARLSEGLGAWL 178

Query: 172 EYMALPVLGMSLLYVATFARITRGSMIETLNSNFIRTARAKGLSYGYIVVKHALKPALLP 231
             + +P + +S++ +A  AR+TR ++ E L  + +RTARAKG+    ++++HAL  A +P
Sbjct: 179 RQLVVPAVTLSIVDIALIARVTRAAVAEALTEDHVRTARAKGIPEYRVLIRHALANAAVP 238

Query: 232 VVSYMGPAFVGIITGSVVIETIFGLPGIGKLFVNAAFNRDYSLVMGVTILIGFLFILFNA 291
           +V+ +G     ++ G V+ ET+F +PG+G L V A  +RDY ++ GVT+   F+++L N 
Sbjct: 239 IVTVIGVGVALLVGGVVITETVFAIPGLGALTVEAILSRDYPVIQGVTLFFSFVYVLVNL 298

Query: 292 IVDILLAYIDPKIRY 306
           +VD+   + DP+IRY
Sbjct: 299 LVDLSYIFFDPRIRY 313