Pairwise Alignments

Query, 306 a.a., oligopeptide ABC transporter permease OppB from Vibrio cholerae E7946 ATCC 55056

Subject, 336 a.a., dipeptide transport system permease protein from Paraburkholderia bryophila 376MFSha3.1

 Score =  201 bits (511), Expect = 2e-56
 Identities = 113/335 (33%), Positives = 185/335 (55%), Gaps = 30/335 (8%)

Query: 1   MLKFIAKRIFEAIPTMLVLITISFFLMRYAPGNPFS---SERPLPPEVMANINAKYGLDK 57
           M +F+ +RI   IPT + +  ++F L+   PG+P      ER + P + A    + GLD+
Sbjct: 1   MFRFVLRRIGMVIPTFIGITILAFALIHLIPGDPIEVMMGERGVDPAMHAAAMHRLGLDE 60

Query: 58  PVSEQYLTYLTNIVQGDFGPSFKYKDYTVNELIASALPVSVKIGLAAFVFTVIMGVTVGT 117
           P+  QY+ Y+   + GD G S       + E +A   P +V++ + A +F +I+G+  G 
Sbjct: 61  PLPMQYVHYIGRALHGDLGTSIITNTSVMGEFLAR-FPATVELSICAMLFALIVGLPAGV 119

Query: 118 IAALKQNTWIDYTIMSTAMLGVVMPSFVLAPVLIYIFAIQFSLFPAGG------------ 165
            AAL++ T +D+ +M TA+ G  MP F    +LI +F+++    P  G            
Sbjct: 120 FAALRRGTAVDHGVMGTALTGYSMPIFWWGLILIMVFSVKLGWTPVSGRIAVEYDIPHVT 179

Query: 166 ----------WQDGGFE----YMALPVLGMSLLYVATFARITRGSMIETLNSNFIRTARA 211
                       +G F+    ++ LP + +  + +A  AR+TR SM+E L  ++IRTARA
Sbjct: 180 GFMLVDAMMSTDEGAFKSALSHLILPAIVLGTIPLAVVARMTRSSMLEVLREDYIRTARA 239

Query: 212 KGLSYGYIVVKHALKPALLPVVSYMGPAFVGIITGSVVIETIFGLPGIGKLFVNAAFNRD 271
           KGLS G ++V HAL+ AL+PVV+ +G     ++ G+V+ ET+F  PGIGK  ++A   RD
Sbjct: 240 KGLSPGRVIVVHALRNALIPVVTVIGLQVGTLLAGAVLTETLFSWPGIGKWLIDAIGRRD 299

Query: 272 YSLVMGVTILIGFLFILFNAIVDILLAYIDPKIRY 306
           Y +V G  ++I  L I  N +VD+L   ++P+IR+
Sbjct: 300 YPVVQGGILMIATLVIFVNLVVDLLYGVLNPRIRH 334