Pairwise Alignments

Query, 543 a.a., peptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 533 a.a., Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) from Pseudomonas fluorescens FW300-N2E2

 Score =  143 bits (360), Expect = 2e-38
 Identities = 130/532 (24%), Positives = 221/532 (41%), Gaps = 71/532 (13%)

Query: 6   ITQALLLGAGLAVATTSFTSFAANVPAGTKLAPVQELVRGNGTEVASLDPHKTEGVPESN 65
           +T AL+  A +A A T+    +   PAG                    DP +     + +
Sbjct: 11  LTLALISSAPMAQAATTLVYCSEASPAG-------------------FDPSQYTSGTDFD 51

Query: 66  VIRDLLEGLVNQDANGN--VVPGVAESWETT-DNKTFTFHIRKDAKWSNGD------PVT 116
              + +   + Q   G   V PG+A  W+ + D   +TFH+R+  K+   D         
Sbjct: 52  ASAETVFNRLTQFKRGGTEVEPGLATRWDVSADGLVYTFHLREGVKFHTTDYFSPSRDFN 111

Query: 117 AHDFVYSFQRAVDPA--------TASPYSWYMEYTKMKNAKEIIAGEKDKSTLGAKAVDD 168
           A D +++FQR +DP         T SPY     +T M     I + EK         VD+
Sbjct: 112 ADDVLFTFQRLLDPQHPFRQAYPTESPY-----FTDMGLNTTIKSVEK---------VDE 157

Query: 169 HTLVFELETAVPYFV--MMMGHTTVKPIHKATV----EKFGDQWTKPENFVGNGAYVLDK 222
           HT+ F L      FV  + M   +V+    A       K GD   KP   +G G +V  +
Sbjct: 158 HTVRFNLNNVDAAFVQNLAMSFASVQSAEYAAQLLKEGKAGDLNQKP---IGTGPFVFKR 214

Query: 223 WVVNERLELKRNPQYWDDKNTVLNKVTYLPIENQVAEMNRFLSGEIQITNELPLEHFKRL 282
           +  + ++    N  YW  ++  L+ + +    +    + +   GE Q++        + +
Sbjct: 215 YQKDSQIRYAGNTAYWKPEDVKLDNLIFSITPDAAVRLQKLKRGECQVSGYPRPADIEVM 274

Query: 283 KKEHPESVQVQGQLCTYYYGFNNKKPPFDDVRVRKALSYAIDRDVVSDAILGQGQKPAYF 342
           +++    V  Q      +  +N   PP D ++VR+AL  AID+  +  A+     + A  
Sbjct: 275 EQDPNLQVLKQPGFNLGFLAYNVTHPPLDQLKVRQALDMAIDKPAIIKAVYQSAGQLAQN 334

Query: 343 LTPEITAGFSPEMPAYGKMTQKERIAEAKKLLEEAGYNKSNPLKF---TLLYNTSENHKK 399
             P     F P +           + +AK LL+EAG      +     T+   ++ N + 
Sbjct: 335 ALPPAQWSFDPNIK-----DAPHDVTKAKALLKEAGVAPGTTIDLWAMTVQRASNPNARM 389

Query: 400 IATAIQSMWKTSLGVDIALENQEWKTYLDTRRQGNFDVTRAGWCGDYNEASSFLTLMLSS 459
            A  IQ  W   +G+   + + EW  Y+   + G  D    GW GD  +  ++L ++ S 
Sbjct: 390 SAQMIQQDW-AKIGIKANIVSYEWGEYIKRAKNGEHDAMIYGWTGDNGDPDNWLGVLYSC 448

Query: 460 NT---SNDPQYHSAEYDAVIEKAKTSTSEEERQKLYADAEKLLARDMPIAPI 508
                SN  ++    YD +I++AK ST  ++R  LY  A+K+L + +PI PI
Sbjct: 449 AAVKGSNYAKWCDPAYDQLIQQAKVSTDRQQRIDLYRQAQKILKQQVPITPI 500