Pairwise Alignments

Query, 543 a.a., peptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 531 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas fluorescens FW300-N2C3

 Score =  147 bits (371), Expect = 1e-39
 Identities = 127/452 (28%), Positives = 207/452 (45%), Gaps = 55/452 (12%)

Query: 83  VVPGVAESWETTDNK-TFTFHIRKDAKWSNGD------PVTAHDFVYSFQRAVDPATASP 135
           V+P +AESW+ +D+  T+TFH+RK  K+   +       + A D V+SFQR +DP     
Sbjct: 69  VIPALAESWDISDDGLTYTFHLRKGVKFHTTEYFKPTRDMNADDVVWSFQRQLDPN---- 124

Query: 136 YSWY------MEYTKMKNAKEIIAGEKDKSTLGAKAVDDHTLVFELETAVPYFV--MMMG 187
           + W+        Y +    KE++           + VD+HT+ F L      F+  + M 
Sbjct: 125 HPWHKLSSVGFPYFESMGFKELLKS--------VEKVDEHTVKFSLTRREAPFLADIAMA 176

Query: 188 HTTVKPIHKAT----VEKFGDQWTKPENFVGNGAYVLDKWVVNERLELKRNPQYWDDKNT 243
            +++ P   A       K GD  +KP   VG G +V  ++  + ++  K NP Y+  K  
Sbjct: 177 FSSIYPAEYADQLLKANKAGDLNSKP---VGTGPFVFQRYNKDAQVRFKANPDYFRGKPP 233

Query: 244 VLNKVTYLPIENQVAEMNRFLSGEIQITNELPLEHFKRLKKEHPESVQVQGQLCTYYYGF 303
               V  +  +N V  M +  + E QI      +    +KK+    V     +   Y   
Sbjct: 234 ADALVLAIATDNNV-RMQKLKTNECQIALYPKPDDIPSIKKDPNLKVAELDAMTVSYTAL 292

Query: 304 NNKKPPFDDVRVRKALSYAIDRDVVSDAILGQGQKP-AYFLTPEITAGFSPEMPAYGKMT 362
           N       DVRVRKA+  A D++   +A+ G+G    A    P    GF+ ++       
Sbjct: 293 NTSHKYMSDVRVRKAIDLAFDKEAYVNALFGKGNATVAVNPYPPTLLGFNHDLK-----N 347

Query: 363 QKERIAEAKKLLEEAGYNKSNPLKFTLLYN-----TSENHKKIATAIQS-MWKTSLGVDI 416
               + +A++LL+EAG  +     FTL        T+ N    A  +Q+ + K  + VDI
Sbjct: 348 PPRNLDKARELLKEAGVPEGTV--FTLFTRNGGGPTNPNPMLGAQMMQADLAKVGIKVDI 405

Query: 417 ALENQEWKTYLDTRRQGNFDVTRAGWCGDYNEASSFLTLMLS----SNTSNDPQYHSAEY 472
            +   EW   L   + G  D+  AGW GD  +  +FLT MLS     N  N  ++ + ++
Sbjct: 406 RV--MEWGEMLKRAKNGEHDMVSAGWAGDNGDPDNFLTPMLSCEAAKNGENYARWCNEKF 463

Query: 473 DAVIEKAKTSTSEEERQKLYADAEKLLARDMP 504
            A+I++A+ + + EER KLY  A+ L  +D+P
Sbjct: 464 QALIDQARATVNPEERIKLYEQAQVLFNQDLP 495