Pairwise Alignments

Query, 543 a.a., peptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 532 a.a., peptide ABC transporter substrate-binding protein from Azospirillum brasilense Sp245

 Score =  162 bits (411), Expect = 2e-44
 Identities = 142/505 (28%), Positives = 219/505 (43%), Gaps = 60/505 (11%)

Query: 42  LVRGNGTEVASLDPHKTEGVPESNVIRDLLEGLVNQDANGNVVPGVAESWETTDNKTFTF 101
           L  G   E ++LDPH     P +   + + E LV+ DA   + P +AESW   D  T+ F
Sbjct: 26  LTVGTSAEPSALDPHYHNLGPNTRARKHVFESLVSMDAKMRLQPELAESWRAIDETTWEF 85

Query: 102 HIRKDAKWSNGDPVTAHDFVYSFQRAVDPATASPYSWYMEYTKMKNAKEIIAGEKDKSTL 161
            +RK  K+ +G   TA DFVY+  R   P  A+  S +  YT              K   
Sbjct: 86  KLRKGVKFHDGTEFTAQDFVYTVCRI--PNVANSPSSFTVYT--------------KGIA 129

Query: 162 GAKAVDDHTLVFELETAVPYFVMMMGHTTVKPI-------HKATVEKFG---DQWTKPEN 211
           G +A D HTL+  ++T  PY ++ +  +T   I          T +K G   D W   + 
Sbjct: 130 GIEAPDPHTLI--IKTGKPYPLLPVELSTFGIISAKAAGGEAVTFDKAGCKADSWPTTQA 187

Query: 212 F------VGNGAYVLDKWVVNERLELKRNPQYWDDKNTVLNKVTYLPIENQVAEMNRFLS 265
           F      +G G +    +   +R  L+RNP YW  +    + V + PI +    +   L+
Sbjct: 188 FNDGSLMIGTGPFKHKSYTKGDRQVLERNPDYWGPQ-AAWDTVVFRPITSDGPRVAALLA 246

Query: 266 GEIQITNELPLEHFKRLKKEHPESV-QVQGQLCTYY-YGFNNKKP---------PFDDVR 314
           G++ +    P++  +RLK     S+ Q Q     Y   G  +  P         P  D +
Sbjct: 247 GDVDMIESPPVQDIERLKSAPNVSLAQAQSNRVIYLALGVQDTPPTITGTDGKNPLKDPK 306

Query: 315 VRKALSYAIDRDVVSDAILGQGQKPAYFLTPEITAGFSPEMPAYGKMTQKERIAEAKKLL 374
           VRKALS A+DRD +   I+    +PA    P   AGF    P   ++T      +AK+LL
Sbjct: 307 VRKALSLAVDRDAIVKRIMMGVAEPANQYLP---AGFYGNNP---EVTVATDANKAKQLL 360

Query: 375 EEAGYNKSNPLKFTLLYNTSENHKKIATAIQSMWKTSLGVDIALENQEWKTYLDTRRQGN 434
            EAGY K   L      +   N  K+A A+  M+ T +GV   ++      +   R +  
Sbjct: 361 AEAGYPKGFQLTLGTPNDRYINDDKVAQAVAQMF-TRIGVQTQVDATTANVFFSKRNKQE 419

Query: 435 FDVTRAGWCGDYNEASSFLTLMLSS-------NTSNDPQYHSAEYDAVIEKAKTSTSEEE 487
           + V  AGW  D  E SS L  ++++        T+N   Y   E D +++ A  +  + +
Sbjct: 420 YSVFLAGWGADSGEMSSPLKALIATPIKEKGYGTTNYTSYSDPELDGMLDTALATVDDAK 479

Query: 488 RQKLYADAEKLLARDMPIAPIYQYV 512
           R+KL   A K       I P++  V
Sbjct: 480 REKLLQAAVKRAVDADIIIPLHYEV 504