Pairwise Alignments

Query, 543 a.a., peptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 521 a.a., extracellular solute-binding protein, family 5 from Pseudomonas syringae pv. syringae B728a

 Score =  147 bits (371), Expect = 1e-39
 Identities = 125/496 (25%), Positives = 213/496 (42%), Gaps = 50/496 (10%)

Query: 40  QELVRGNGTEVASLDPHKTEGVPESNVIRDLLEGLVNQDANGNVVPGVAESWETTDNKTF 99
           Q+L  G    V+SLDP       + +V     E LV++  +   +PG+A+SW+  D+ T+
Sbjct: 23  QDLRIGYADPVSSLDPQLNNYAGDRSVALHAFESLVSR-RDDKTLPGLAKSWKVVDDTTW 81

Query: 100 TFHIRKDAKWSNGDPVTAHDFVYSFQRAVD-PATASPYSWYMEYTKMKNAKEIIAGEKDK 158
            F +R D KW +G P+TA D V+SF+RA + P + + Y+  M                 +
Sbjct: 82  EFALRDDVKWQDGTPLTADDLVFSFERARNVPGSVASYAGAM-----------------R 124

Query: 159 STLGAKAVDDHTLVFELETAVPYFVMMMGHTTVKPIHKATVEKFGDQWTKPENFVGNGAY 218
           +    KA DDHTL+ +  +     +  +    +   H        D +   +  +G G Y
Sbjct: 125 TVESIKARDDHTLIIKTRSPNANLLPDIDSIYIVSRHAGAAASSAD-YNSGKAMIGTGPY 183

Query: 219 VLDKWVVNERLELKRNPQYWDDKNTVLNKVTYLPIENQVAEMNRFLSGEIQITNELPLEH 278
               +V  +R    RN  YW  K T  +KV +  I N        L+G++ + +++    
Sbjct: 184 RFVSFVPGDRTIFARNDNYWGGKPT-WDKVDFRFIANAANRTAALLAGDVDVIDKVSPTD 242

Query: 279 FKRLKKEHPESV-QVQGQLC-----------TYYYGFNNKKP----PFDDVRVRKALSYA 322
             RL+K    +V   QG                +   N  KP    P  DVRVRKALS A
Sbjct: 243 VARLRKTPNVNVFAYQGLRALIIQPSFRAGPNEFIRDNAGKPLAENPLLDVRVRKALSLA 302

Query: 323 IDRDVVSDAILGQGQKPAYFLTPEITAGFSPEMPAYGKMTQKERIAEAKKLLEEAGYNKS 382
           I+R  +++ I+      A    P  T G++P++           + +AK LL +AG+ + 
Sbjct: 303 INRPAINERIMQGTVTEANQWMPANTFGYNPQI-----KNIPYDLKQAKDLLAQAGFPEG 357

Query: 383 NPLKFTLLYNTSENHKKIATAIQSMWKTSLGVDIALENQEWKTYLDTRRQGNFDVTRAGW 442
             L   +  +      ++  A+   W T +GV + LE   W  Y     +    ++   W
Sbjct: 358 FQLTVHVPGDRYPQAPEVMQAVAQFW-TRIGVKVQLEVLPWAVYAGKANKNELAISVIAW 416

Query: 443 CGDYNEASSFLTLMLSS-------NTSNDPQYHSAEYDAVIEKAKTSTSEEERQKLYADA 495
                EA+  LT +L++         SN   Y +   D  +  +     E  R+K+  D+
Sbjct: 417 GNGTGEAAYALTNILTTVDSSKGQGASNWGHYSNPLVDKALADSTAEFDEARRRKILQDS 476

Query: 496 EKLLARDMPIAPIYQY 511
            ++++ D+ I P++ Y
Sbjct: 477 VQIVSDDVGIIPLFHY 492