Pairwise Alignments

Query, 543 a.a., peptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 538 a.a., peptide-binding periplasmic ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  164 bits (415), Expect = 8e-45
 Identities = 148/519 (28%), Positives = 245/519 (47%), Gaps = 47/519 (9%)

Query: 49  EVASLDPHKTEGVPESNVIRDLLEGLVNQ-DANGNVVPGVAESWETT-DNKTFTFHIRKD 106
           +V++LDP         ++I+ L +GL++       + P +AES+E + D K FTF +RK 
Sbjct: 37  DVSTLDPAIGYDWQNWSMIKSLFDGLMDYVPGTTELRPDLAESYEISEDGKIFTFKLRKG 96

Query: 107 AKWSNGDPVTAHDFVYSFQRAVDPATASPYSWYMEYTKMKNAKEIIAGEKDKSTLGAKAV 166
            K+ NG  +TA D  YS +R V+PAT SP + +  +  +K  +E  AG K     G    
Sbjct: 97  VKFHNGRELTAQDVKYSIERVVNPATQSPGAGF--FATIKGVEEASAG-KGGELSGITVQ 153

Query: 167 DDHTLVFELETAVPYFVMMMGHTTVKPIHKATVEKFGDQWTKPENFVGNGAYVLDKWVVN 226
           D HT+ FEL      F+ +M       + K  VEK G  + K  N VG+GA+ L +W + 
Sbjct: 154 DPHTIRFELTRPDATFLHVMALNFAHVVPKEEVEKHGADFGK--NPVGSGAFKLAEWTLG 211

Query: 227 ERLELKRNPQYWDDKNTVLNKVTYLPIENQVAEMNRFLSGEIQITNE-LPLEHFKRLKKE 285
           +RL  +R   YW++    L+++T+   +  V  + R  +GEI +  + +P   F  +  +
Sbjct: 212 QRLVFERFTDYWNEGLPKLDRITFEVGQEPVVALLRLQNGEIDVPGDGIPPAKFVEVTND 271

Query: 286 --HPESVQVQGQLCTYYYGFNNKKPPFDDVRVRKALSYAIDRDVVSDAILGQGQKPAYFL 343
               + +   GQL T Y   N K  PFD V VRKA++ AI++D +   I G+       L
Sbjct: 272 PNFKDLIIRGGQLHTGYVTMNVKMAPFDKVEVRKAVNMAINKDRILRIINGRAVAANQPL 331

Query: 344 TPEITAGFSPEMPAYGKMTQKERIAEAKKLLEEAGYNKSNPLKFTLLYNTSENHKKIATA 403
            P +  G++ +   Y    +      AKKLLE+AG    +     L    ++   +IA A
Sbjct: 332 PPSM-PGYAKDYAGYAYDPE-----GAKKLLEQAGL--GDGFSTELYVMNTDPQPRIAQA 383

Query: 404 IQSMWKTSLGVDIALENQEWKTYLDTRRQGN-FDVTRAG---WCGDYNEASSFLTLML-- 457
           IQ   K ++G+  ++++      +    + N   +  +G   W  D+ + S+F   +L  
Sbjct: 384 IQQDLK-AIGITASIKSLAQANVIAAGGEENQAPMIWSGGMAWIADFPDPSNFYGPILGC 442

Query: 458 ----------SSNTSNDPQYHSAEYDAVIEKAKTSTSEEERQKLYADAEKLLARDMPIAP 507
                     S   + +    +AE DA+ + AK +    ER+ L+ D    +  D P AP
Sbjct: 443 GGAVPGGWNWSWYCNEELDKKAAEADAIADPAKAA----EREALWRDIYLKIMEDAPWAP 498

Query: 508 IYQYVRSRLVSPTVGGYPSNNAE--------DKIYAKDL 538
           I+   R  + S  +GG      +        D++YAKD+
Sbjct: 499 IFNEERFTIRSERIGGDDKLFVDPVHIPVHYDQVYAKDV 537