Pairwise Alignments

Query, 543 a.a., peptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 529 a.a., extracellular solute-binding protein, family 5 (NCBI) from Rhodospirillum rubrum S1H

 Score =  157 bits (397), Expect = 9e-43
 Identities = 128/467 (27%), Positives = 214/467 (45%), Gaps = 57/467 (12%)

Query: 83  VVPGVAESWETT-DNKTFTFHIRKDAKWSNGD------PVTAHDFVYSFQRAVDP----- 130
           + PG+AESWE + D KT+TFH+RK   + + D         A D ++SF+R +       
Sbjct: 69  IEPGLAESWEVSPDGKTYTFHLRKGVTFHDSDIFKPTRQFNADDVIWSFERQLKKDHPYH 128

Query: 131 ATASPYSWYMEYTKMKNAKEIIAGEKDKSTLGAKAVDDHTLVFELE--------TAVPYF 182
           A +     Y E   M    E I           + VDD+T+VF L              F
Sbjct: 129 AVSGGTYDYFEGMSMNTLLEKI-----------EKVDDYTVVFHLSRPEAPMLANLAMDF 177

Query: 183 VMMMGHTTVKPIHKATVEKFGDQWTKPENFVGNGAYVLDKWVVNERLELKRNPQYWDDKN 242
             +        + KA   +  DQ  KP   +G G ++   +  + ++  + NP YW  K 
Sbjct: 178 ASIFSAEYADKMMKAGTPEVVDQ--KP---IGTGPFMFRGYQKDAQIRYEANPTYWQGK- 231

Query: 243 TVLNKVTYLPIENQVAEMNRFLSGEIQITNELPLEHFKRLKKEHPESVQVQGQLCTYYYG 302
             ++++ ++   +      +  +GE  +         + +K +   ++  Q  L   Y  
Sbjct: 232 AAIDRLVFVITPDASVRYAKLKAGECHVMPYPNPADLEAMKTDKAVNLMHQEGLNVGYLA 291

Query: 303 FNNKKPPFDDVRVRKALSYAIDRDVVSDAILGQGQKPAYFLTPEITAGFSPEMPAYGKMT 362
           +N +K PFDDVRVRKAL+ AID+  + DA+  QG   A       T    P + +Y K  
Sbjct: 292 YNVEKKPFDDVRVRKALNLAIDKKAIIDAVY-QGAGTA------ATNPIPPTIWSYNKAV 344

Query: 363 QKERI--AEAKKLLEEAGYN--KSNPLKFTLLYNTSENHKKIATAIQSMWKTSLGVDIAL 418
           + +    A AKKLL EAG    K+      +    + N +++A  +Q+ WK ++GVD  +
Sbjct: 345 KDDAFDPAAAKKLLAEAGVKDLKTTIWAMPVQRPYNPNARRMAEILQANWK-AVGVDAEI 403

Query: 419 ENQEWKTYLDTRRQGNFDVTRAGWCGDYNEASSFLTLMLSSNT---SNDPQYHSAEYDAV 475
            + EW  YL   + G  +    GW GD  +  +FL ++L  +    +N  ++    ++ +
Sbjct: 404 TSYEWGEYLKRAKAGEHETALFGWTGDNGDPDNFLAVLLGCDAIPGNNYARWCDKSFENL 463

Query: 476 IEKAKTSTSEEERQKLYADAEKLLARDMPIAPI-----YQYVRSRLV 517
           I+KAK +TS+EER KLY +A+ +     P A I     Y+ +R  ++
Sbjct: 464 IQKAKIATSQEERVKLYEEAQVIFKEQAPWATIAHSVVYEPIRKEVI 510