Pairwise Alignments

Query, 543 a.a., peptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 545 a.a., extracellular solute-binding protein, family 5 (NCBI) from Rhodospirillum rubrum S1H

 Score =  342 bits (877), Expect = 2e-98
 Identities = 203/537 (37%), Positives = 298/537 (55%), Gaps = 14/537 (2%)

Query: 8   QALLLGAGLAVATTSFTSFAANVPAGTKLAPVQELVRGNGTEVASLDPHKTEGVPESNVI 67
           +AL  G GLAV   +   +A    A   L        GN  E  S+DPH    V  S ++
Sbjct: 20  RALAFGLGLAVVGGAAGPWAPAAQAAGVLRI------GNDGEPQSMDPHFVSTVQTSRLL 73

Query: 68  RDLLEGLVNQDANGNVVPGVAESWETT-DNKTFTFHIRKDAKWSNGDPVTAHDFVYSFQR 126
            D+   LV   A G  +PG AE W  + D  T+TF +R D  WS+G PVTA DFVYS++R
Sbjct: 74  DDMYLALVTFGAKGEAIPGAAERWTISPDGLTYTFTLR-DHTWSDGTPVTAEDFVYSWRR 132

Query: 127 AVDPATASPYSWYMEYTKMKNAKEIIAGEKDKSTLGAKAVDDHTLVFELETAVPYFVMMM 186
            +DPA  + Y+  + Y  +K A+   +G+     + AKA+D  TL   L +  PYF+  +
Sbjct: 133 VLDPAMGAEYA-SLAYI-IKGAEAYNSGQGKVEDVAAKALDAKTLEVTLTSPAPYFLAQL 190

Query: 187 GHTTVKPIHKATVEKFGDQWTKPENFVGNGAYVLDKWVVNERLELKRNPQYWDDKNTVLN 246
            H    P+ K  VEK+G  WTKPE FV NGAY L  W+ N   +L +N  ++D K+   +
Sbjct: 191 THQVFMPVPKHVVEKYGRDWTKPETFVVNGAYKLASWLPNVEAKLVKNENFYDAKDVFFD 250

Query: 247 KVTYLPIENQVAEMNRFLSGEIQITNELPLEHFKRLKKEHPESVQVQGQLCTYYYGFNNK 306
           +V Y   E++ A   R+ +GE+ I  E+  E    L+    +S+++      Y Y FN  
Sbjct: 251 EVIYYTYEDRTAMQKRYRAGELDICREIASEQITWLRDNLADSLRIAPYAGIYDYAFNTT 310

Query: 307 KPPFDDVRVRKALSYAIDRDVVSDAILGQGQKPAY-FLTPEITAGFSPEMPAYGKMTQKE 365
           + PFDD+RVR+AL+ A+D + +S+ +L  G+ PA+ F+ P +    +P   A+  +  KE
Sbjct: 311 QKPFDDLRVRQALTMAVDVEAISEKVLRTGELPAWSFVPPGVENYTTPATVAWKDVPFKE 370

Query: 366 RIAEAKKLLEEAGYNKSNPLKFTLLYNTSENHKKIATAIQSMWKTSLGVDIALENQEWKT 425
           R  +A+ LL EAG++K  PL FTL YNTSENHK++A AI SMWK  +GV + L N + K 
Sbjct: 371 RQEKARALLAEAGFSKDKPLTFTLRYNTSENHKRVAVAIASMWK-QIGVSVELFNTDGKI 429

Query: 426 YLDTRRQGNFDVTRAGWCGDYNEASSFLTLML-SSNTSNDPQYHSAEYDAVIEKAKTSTS 484
           +    +Q  F V R GW  DYN+  SFL  M   +   N   Y + EY+A++++   +  
Sbjct: 430 HYADLKQKAFQVAREGWIADYNDPQSFLFKMEGKTGPLNYSGYDNPEYNALMDEGALTID 489

Query: 485 EEERQKLYADAEKLLARDMPIAPIYQYVRSRLVSPTVGGYPSNNAEDKIYAKDLYIK 541
             +R ++   AE L  RD+P+ PIY YV  +LVSP + G+  +NA DK   + L +K
Sbjct: 490 LAKRAEILKKAEALAMRDVPVMPIYYYVSKQLVSPKLVGW-HDNALDKHVTRFLSLK 545