Pairwise Alignments

Query, 543 a.a., peptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 497 a.a., ABC transporter substrate-binding protein from Rahnella sp. WP5

 Score =  159 bits (403), Expect = 2e-43
 Identities = 135/496 (27%), Positives = 223/496 (44%), Gaps = 47/496 (9%)

Query: 25  SFAANVPAGTKLAPVQELVRGNGTEVASLDPHKTEGVPESNVIRDLLEGLVNQDANGNVV 84
           S A  +   T  A   ELV        ++DP   +    + ++ +L + LV +DAN  + 
Sbjct: 10  SLALLISLTTPAAFASELVIAQPASATAMDPGFLK--ESATLVDNLFDTLVLRDANMQLQ 67

Query: 85  PGVAESWETTDNKTFTFHIRKDAKWSNGDPVTAHDFVYSFQRAVDPATASPYSWYMEYTK 144
           PG+A SW++ D+ T+ F +R+  K+S+G+PV A    +S  R +DPA  +P   Y+   K
Sbjct: 68  PGLATSWKSPDDTTWEFTLRQGVKFSDGEPVNAQAVKFSIDRILDPANHAPTISYIRTIK 127

Query: 145 MKNAKEIIAGEKDKSTLGAKAVDDHTLVFELETAVPYFVMMMGHTTVKPIHKATVEKFG- 203
                              +   D+ +        P     M       +  A V K G 
Sbjct: 128 -----------------SVEVTGDYQVKIHTTGPDPLLPTRMSRYPTYIVPPAYVTKVGA 170

Query: 204 -DQWTKPENFVGNGAYVLDKWVVNERLELKRNPQYWDDKNTVLNKVTYLPIENQVAEMNR 262
            +   KP   VG+GAY L  ++ +E++ ++ NP YW  K   ++ VT+ PI      +  
Sbjct: 171 AEFARKP---VGSGAYTLTAFIPDEKVVMQANPGYWRGK-PAIDTVTWRPIPEATGRITA 226

Query: 263 FLSGEIQITNELPLEHFKRLKKE---HPESVQVQGQLCTYYYGFNNKKPPFDDVRVRKAL 319
            L+GE+Q+ + +P +    LK +   H E V+  G   T Y G  N + P +DVRVR+AL
Sbjct: 227 LLTGEVQLVDGVPADLVPALKNKPGVHLEQVKNGG--LTIYLGLKNDQKPLNDVRVRQAL 284

Query: 320 SYAIDRDVVS-DAILGQGQKPAYFLTPEITAGFSPEMPAYGKMTQKERIAEAKKLLEEAG 378
           S A++R   + D + G G        P+     +   PA       + IA+AK LL EAG
Sbjct: 285 SLALNRTAYTRDLLHGFGTPTGTMAGPKDFGYEAIPAPA-------QDIAKAKALLAEAG 337

Query: 379 YNKSNPLKFTLLYNTSENHKKIATAIQSMWK--TSLGVDIALENQEWKTYL-DTRRQGNF 435
           Y    P  FTL +     +   A   Q++ +   ++GV   LE  EW  Y      Q   
Sbjct: 338 Y----PQGFTLRFQAPRRYIASADVAQAIVQDLAAIGVKAQLEVPEWSVYTQQVAAQKQA 393

Query: 436 DVTRAGWCGDYN-EASSFLTLMLSSNTSNDPQYHSAEYDAVIEKAKTSTSEEERQKLYAD 494
            +    W      +A + L  +L S        +S E DA++  ++T+    +R+K+   
Sbjct: 394 PMYMLAWGSTQTLDADAALYPILHSGEPYS-TVNSPELDALLNSSRTTVDPAKREKILQQ 452

Query: 495 AEKLLARDMPIAPIYQ 510
            ++++A   P+ P+Y+
Sbjct: 453 IQQVVASQQPLIPLYK 468