Pairwise Alignments

Query, 543 a.a., peptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 543 a.a., oligopeptide ABC transporter substrate-binding protein OppA from Klebsiella michiganensis M5al

 Score =  583 bits (1503), Expect = e-171
 Identities = 284/537 (52%), Positives = 373/537 (69%), Gaps = 2/537 (0%)

Query: 6   ITQALLLGAG-LAVATTSFTSFAANVPAGTKLAPVQELVRGNGTEVASLDPHKTEGVPES 64
           IT+  L+ AG L+   T   + AA+VPAG +LA  Q LVR NG+EV SLDPHK EGVPES
Sbjct: 4   ITKKSLVAAGVLSALMTINAAVAADVPAGVQLADKQTLVRNNGSEVQSLDPHKIEGVPES 63

Query: 65  NVIRDLLEGLVNQDANGNVVPGVAESWETTDNKTFTFHIRKDAKWSNGDPVTAHDFVYSF 124
           N+ RDL EGL+  D +G+ V GVAE W+  D K +TFH+RKDAKWS+G PVTA DFVYS+
Sbjct: 64  NINRDLFEGLLVSDLDGHPVAGVAEKWDNKDFKVWTFHLRKDAKWSDGTPVTAQDFVYSW 123

Query: 125 QRAVDPATASPYSWYMEYTKMKNAKEIIAGEKDKSTLGAKAVDDHTLVFELETAVPYFVM 184
           QR  DP TASPY+ Y++Y  + N  +IIAG+K  + LG KA+DDHT    L   VPYF  
Sbjct: 124 QRLADPKTASPYASYLQYGHLANIDDIIAGKKPATDLGVKALDDHTFEVTLSEPVPYFYK 183

Query: 185 MMGHTTVKPIHKATVEKFGDQWTKPENFVGNGAYVLDKWVVNERLELKRNPQYWDDKNTV 244
           ++ H +V P+ K+ +EKFGD+WT+P N V NGAY L  WVVNER+ L+RN  YWD+  TV
Sbjct: 184 LLVHPSVSPVPKSAIEKFGDKWTQPANIVSNGAYKLKDWVVNERIVLERNTNYWDNAKTV 243

Query: 245 LNKVTYLPIENQVAEMNRFLSGEIQIT-NELPLEHFKRLKKEHPESVQVQGQLCTYYYGF 303
           +N+VT+LPI ++V ++NR+ SGEI +T N +P+E F++LKKE P+ V V   LCTYYY  
Sbjct: 244 INQVTFLPISSEVTDVNRYRSGEIDMTYNNMPIELFQKLKKEIPKEVHVDPYLCTYYYEI 303

Query: 304 NNKKPPFDDVRVRKALSYAIDRDVVSDAILGQGQKPAYFLTPEITAGFSPEMPAYGKMTQ 363
           NN+K PF DVRVR AL  A+DRD++ + +  QG  PAY  TP  T G     P + K +Q
Sbjct: 304 NNQKAPFTDVRVRTALKMALDRDIIVNKVKNQGDLPAYSYTPPYTDGMKLIEPEWFKWSQ 363

Query: 364 KERIAEAKKLLEEAGYNKSNPLKFTLLYNTSENHKKIATAIQSMWKTSLGVDIALENQEW 423
           ++R  EAKKLL EAGY+   PL F LLYNTS+ HKK+A A+ S+WK +LGV++ LENQEW
Sbjct: 364 EKRNEEAKKLLAEAGYSADKPLTFNLLYNTSDLHKKLAIAVASIWKKNLGVNVKLENQEW 423

Query: 424 KTYLDTRRQGNFDVTRAGWCGDYNEASSFLTLMLSSNTSNDPQYHSAEYDAVIEKAKTST 483
           KT+LD R QG FD+ RAGWC DYNE +SFL  MLS +++N   Y S  +D +I +   ++
Sbjct: 424 KTFLDNRHQGTFDIARAGWCADYNEPTSFLNTMLSDSSNNTSHYKSPAFDKIIAETLKTS 483

Query: 484 SEEERQKLYADAEKLLARDMPIAPIYQYVRSRLVSPTVGGYPSNNAEDKIYAKDLYI 540
            E +R  LYA +E+ L +D  I P++ YV +RLV P VGGY   +  D  Y +++YI
Sbjct: 484 DEGKRADLYAQSEQQLDKDSVIVPVFYYVNARLVKPWVGGYTGKDPLDNTYTRNMYI 540