Pairwise Alignments

Query, 543 a.a., peptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 535 a.a., Periplasmic dipeptide transport protein from Enterobacter sp. TBS_079

 Score =  136 bits (342), Expect = 2e-36
 Identities = 114/462 (24%), Positives = 201/462 (43%), Gaps = 47/462 (10%)

Query: 83  VVPGVAESWETT-DNKTFTFHIRKDAKWSNGDPV------TAHDFVYSFQRAVDPATASP 135
           V+PG+AE W+ + D KT+TFH+R+  KW +           A D V+SF R  +    +P
Sbjct: 74  VIPGLAEKWDVSEDGKTYTFHLRQGVKWQDNKEFKPTRDFNADDVVFSFDRQKN--AQNP 131

Query: 136 Y----SWYMEYTKMKNAKEIIAGEKDKSTLGAKAVDDHTLVFELETAVPYFVMMMGHTTV 191
           Y        EY +    +++IA          K VDD T+ F L      F+  +     
Sbjct: 132 YHKVSGGSYEYFEGMGLQDLIAE--------VKKVDDKTVQFVLTRPEAPFLADLAMDFA 183

Query: 192 KPIHKATVE---KFGDQWTKPENFVGNGAYVLDKWVVNERLELKRNPQYWDDKNTVLNKV 248
             + K   +   K G       N +G G + L ++  + R+  K  P +W  K  + +++
Sbjct: 184 SILSKEYADNMLKAGTPEKVDLNPIGTGPFQLLQYQKDSRILYKAFPGFWGTKPQI-DRL 242

Query: 249 TYLPIENQVAEMNRFLSGEIQITNELPLEHFKRLKKEHPESVQVQGQLCTYYYGFNNKKP 308
            +    +      +    E Q+          R+K++   ++  Q  L   Y  FN +K 
Sbjct: 243 VFSITPDASVRYAKLQKNECQVMPYPNPADIARMKQDKNINLLEQAGLNVGYLSFNTEKK 302

Query: 309 PFDDVRVRKALSYAIDRDVVSDAILGQGQKPAYFLTPEITAGFSPEMPAYGKMTQKERIA 368
           PFDDV+VR+AL+YA++++ +  A+       A  L P    G++ ++  Y    +K    
Sbjct: 303 PFDDVKVRQALTYAVNKEAIIKAVYQGAGVAAKNLIPPTMWGYNDDVKDYTYDPEK---- 358

Query: 369 EAKKLLEEAGYNKSNPLKFTLL-----YNTSENHKKIATAIQSMWKTSLGVDIALENQEW 423
            AK LL+EAG  K   ++   +     YN   N +++A  +Q+ W   +GV   +   EW
Sbjct: 359 -AKALLKEAGQEKGFTVELWAMPVQRPYN--PNARRMAEMVQADW-AKVGVQAKIVTYEW 414

Query: 424 KTYLDTRRQGNFDVTRAGWCGDYNEASSFLTLMLSSNTSNDPQYHS----AEYDAVIEKA 479
             YL   + G       GW GD  +  +F   + S   + D   +S      ++ +I+ A
Sbjct: 415 GEYLKRAKAGEHQAVMMGWTGDNGDPDNFFATLFSCAAAKDGSNYSRWCYKPFEDLIQPA 474

Query: 480 KTSTSEEERQKLYADAEKLLARDMPI-----APIYQYVRSRL 516
           + +    +R +LY  A+ ++    P      + +Y+ VR  +
Sbjct: 475 RATDDHNKRIELYKQAQVVMHDQAPALIVAHSTVYEPVRKEV 516