Pairwise Alignments

Query, 543 a.a., peptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., acetate kinase (RefSeq) from Shewanella sp. ANA-3

 Score =  140 bits (352), Expect = 2e-37
 Identities = 122/521 (23%), Positives = 231/521 (44%), Gaps = 58/521 (11%)

Query: 16  LAVATTSFTSFAANVPAGTKLAPVQELVRGNGTEVASLDPHKTEGVPESNVIRDLLEGLV 75
           L ++T  F      V  G +  P   +    G   +      T G         +   LV
Sbjct: 8   LCLSTAVFCMSGLLVACGPQRLPSGLVYCSEGNPESFNPQLVTSGTTIDATSHQIYSRLV 67

Query: 76  NQDA-NGNVVPGVAESW-ETTDNKTFTFHIRKDAKWSNGDPVT------AHDFVYSFQRA 127
           + DA +G +VP +A SW E+ D  ++ F +R++ K+ +    T      A D ++SF R 
Sbjct: 68  DYDALSGQLVPALATSWAESDDGLSYRFTLRENVKFQHSSRFTPSRDFNADDVLFSFNRI 127

Query: 128 VD---PATASPYSWYMEYTKMKNAKEIIAGEKDKSTLGAKAVDDHTLVFELETAVPYFVM 184
           +D   P      + Y  +  +  ++++ + EK         ++DH ++F L      F+ 
Sbjct: 128 IDKHHPYHGVSRTGYPFFQSIGFSEQVKSVEK---------INDHEVIFRLARKDASFLS 178

Query: 185 MMGHTTVKPIHKATVEKFGDQWTK---PENF----VGNGAYVLDKWVVNERLELKRNPQY 237
            +       +      ++ DQ      PEN     +G G + L  +  NE +  +RNP +
Sbjct: 179 NLATDFAVILSS----EYADQQLALGHPENLDHFAIGTGPFTLVHYAKNEYIRYRRNPDF 234

Query: 238 WDDKNTVLNKVTYLPIENQVAEMNRFLSGEIQIT-----NELPLEHFKRLKKEHPESVQV 292
           W +   V + + Y         + + ++G+  ++      ELP+     +K+    +++ 
Sbjct: 235 WGEPAKV-DMLVYDITPKSTVRLAKLIAGDCSVSALPKAGELPV-----IKQHEQLNIES 288

Query: 293 QGQLCTYYYGFNNKKPPFDDVRVRKALSYAIDRDVVSDAILGQGQKPAYFLTPEITAGFS 352
           Q  L   ++ FN +KPP DDVRVR+AL+YA+D+  +  A+       A  + P  +  + 
Sbjct: 289 QPGLNVAFWAFNTQKPPLDDVRVRRALAYAVDKQNILRAVYQNTAIEAIGVLPPASWAYD 348

Query: 353 PEMPAYGKMTQKERIAEAKKLLEEAGYNKSN----PLKFTLLYNTSENHKKIATAIQSMW 408
                     QK     A+ LL+EAG    +     +     YN   N  K A  IQS  
Sbjct: 349 SNKKLLDYNPQK-----ARDLLKEAGIKHLSIDIWAMPVARAYN--PNALKTAELIQSD- 400

Query: 409 KTSLGVDIALENQEWKTYLDTRRQGNFDVTRAGWCGDYNEASSFLTLMLS----SNTSND 464
             ++GV + + + +W  +     +  +D    GW  D ++  +F T +LS     + +N 
Sbjct: 401 LANIGVKVNIISYDWSVFSQRLSRDEYDSVLIGWNADNSDPDNFFTPLLSCSAMQSNNNR 460

Query: 465 PQYHSAEYDAVIEKAKTSTSEEERQKLYADAEKLLARDMPI 505
            ++ + E+DA++++A+  +++ ER+++Y +AE  LA  +P+
Sbjct: 461 SRWCNKEFDAILDRAREVSTQAERKEIYQEAEAFLAEQVPM 501