Pairwise Alignments

Query, 534 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 678 a.a., Sensory box histidine kinase from Pseudomonas fluorescens FW300-N2E2

 Score =  101 bits (251), Expect = 1e-25
 Identities = 87/287 (30%), Positives = 149/287 (51%), Gaps = 27/287 (9%)

Query: 259 QLEEMNTKLTLMKDKLVETEKMISIGTLAAGFAHEINNPNGALKSHLQLLQQDFN-QLKV 317
           +++++  +L+L ++ +V++EKM+S+G LAAG AHEINNP GA+  ++Q +++  + +L  
Sbjct: 390 RIDDITQRLSL-EEMMVQSEKMLSVGGLAAGMAHEINNPLGAILHNVQNIRRRLSPELPK 448

Query: 318 GFEQIDILLSGSDFHGKFTQTKNALYLEESFSGIEESLRDALHCVDRIKTIVDKVQRCQA 377
             EQ ++L    +   ++ Q +    + +   GI+++   A   V  + +   +  R  A
Sbjct: 449 NLEQAELLGIQLEEVNRYLQGRE---IPQLLDGIQQAGARAAKIVTHMLSFSRRSTRQMA 505

Query: 378 EPALHDSSWVSPLSLVEQAIQICG----LREWVVWKEQTLY----PPL--IYCYSNDFVT 427
              L         +L++QA++I G    L     +K Q +     P L  +   +N+   
Sbjct: 506 PCDLP--------ALIDQAVEIAGNDFDLAIGFDFKGQAITRQFDPNLGPVPGTANELEQ 557

Query: 428 ALSAILNNAYQAY---ASDDPMIRIELSLRHDHQQLEIEVRDFGRGMSIEEKQHAFDPFF 484
            L  +L NA QA      D    RI L  R +    EI+V D G GMS   ++  F+PFF
Sbjct: 558 VLLNLLKNAAQAIHQRQDDSEPGRIILRTRLNPPWAEIQVEDNGIGMSENVRKRTFEPFF 617

Query: 485 TTHDVGKGVGLGLTEAYSSI-KKYDGDIQLFSELRQGTRVLITLPLA 530
           TT ++G+G GLGL+ +Y  I   + G +++ S   QGT   + LPLA
Sbjct: 618 TTKEIGQGTGLGLSVSYFIITNNHKGQMEVQSAPGQGTCFTLRLPLA 664