Pairwise Alignments

Query, 534 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 796 a.a., PAS/PAC sensor hybrid histidine kinase from Pseudomonas syringae pv. syringae B728a

 Score = 74.3 bits (181), Expect = 2e-17
 Identities = 68/290 (23%), Positives = 124/290 (42%), Gaps = 46/290 (15%)

Query: 258 QQLEEMNTKLTLMKDKLVETEKMISIGTLAAGFAHEINNPNGALKSHLQLLQQDFNQLKV 317
           Q  EE N  L L +D L + +K+ +IG L  G AH+ NN    ++S   LL+    +   
Sbjct: 397 QAEEEANEALRLSQDALHQAQKLEAIGQLTGGVAHDFNNLLTVIRSCSDLLKSPNLEEHR 456

Query: 318 GFEQIDILLSGSDFHGKFTQTKNALYLEESFSGIEESLRDALHCVDRIKTIVDKVQRCQA 377
             + ++ + S  D   + T    A    ++   ++  + D    V RI  ++D +   + 
Sbjct: 457 RVKYVEAISSTVDRAARLTGQLLAFARRQA---LQPEVFDVCKSVARIGEMMDTLTGARI 513

Query: 378 EPALHDSSWVSPLSLVEQAIQICGLREWVVWKEQTLYPPLIYCYSNDFVTALSAILNNAY 437
           + ++                            +    P  I+   + F TAL  ++ NA 
Sbjct: 514 QVSI----------------------------DLPAEPCFIFADGSQFDTALVNMVVNAR 545

Query: 438 QAYASDDPM-IRIELSLRHDHQQ--------------LEIEVRDFGRGMSIEEKQHAFDP 482
            A +    + I++E +      Q              + + + D G G++ E+    F+P
Sbjct: 546 DAMSGAGRLVIKVECAACPADDQPASLGEGDYIEGDYVRVSLTDTGAGIAKEKLGLIFEP 605

Query: 483 FFTTHDVGKGVGLGLTEAYSSIKKYDGDIQLFSELRQGTRVLITLPLAPN 532
           F+TT  VG+G GLGL++ +   K+  G++ + SEL +G+R  + LP A N
Sbjct: 606 FYTTKSVGQGTGLGLSQVFGFAKQSGGEVLVESELGKGSRFTLCLPSAQN 655