Pairwise Alignments

Query, 534 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 691 a.a., PAS from Pseudomonas syringae pv. syringae B728a

 Score = 73.2 bits (178), Expect = 3e-17
 Identities = 79/300 (26%), Positives = 129/300 (43%), Gaps = 49/300 (16%)

Query: 243 EDKVNQRTETLLAKNQQLEEMNTKLTLMKDKLVETEKMISIGTLAAGFAHEINNPNGALK 302
           E+ V +  +TL    Q++E+   +   ++D L  ++KM ++G L  G AH+ NN    + 
Sbjct: 275 EEAVRELNQTL---EQRIEQAVFEREQIEDALRHSQKMDAVGQLTGGIAHDFNNLLAGIS 331

Query: 303 SHLQLLQQDFNQLKVGFEQIDILLSGSDFHGKFTQTKNALYLEESFSGIEESLRDALHCV 362
             L+L+ +   Q +VG   +D  +S                + +       SL   L   
Sbjct: 332 GSLELITKRLAQGRVG--DVDRYVS----------------VAQGAVRRAASLTHRLLAF 373

Query: 363 DRIKTIVDKVQRCQAEPALHDSSWVSPLSLVEQAIQICGLREWVVWKEQTLYPPLIYCYS 422
            R +T+  +V        +HD   +   ++  +        +  V     L+P LI    
Sbjct: 374 SRRQTLSPRVT--DVNGLIHDMEELIARTVGPEI-------DIKVVAHDDLWPALI---- 420

Query: 423 NDFVTALSAILN---NAYQAYASDDPMI------RIELSLRHDH-----QQLEIEVRDFG 468
            D     S++LN   NA  A  +   +I       +E     DH     + L I V D G
Sbjct: 421 -DHAQLESSLLNLCLNARDAMPNGGRIIIETANASLEECTDPDHGIPAGEHLSIRVTDTG 479

Query: 469 RGMSIEEKQHAFDPFFTTHDVGKGVGLGLTEAYSSIKKYDGDIQLFSELRQGTRVLITLP 528
            GMS +    AF+PFFTT  +G G GLGL+  Y  +++  G I++ S   QGT V++ LP
Sbjct: 480 IGMSPDIAAKAFEPFFTTKAIGAGTGLGLSMVYGFVRQSGGQIRVESVEGQGTSVVMHLP 539