Pairwise Alignments

Query, 534 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 708 a.a., sensor histidine kinase (RefSeq) from Shewanella amazonensis SB2B

 Score = 94.0 bits (232), Expect = 2e-23
 Identities = 102/428 (23%), Positives = 180/428 (42%), Gaps = 74/428 (17%)

Query: 119 PITDVIEVSGTLFGTVFIGFDLSYLEQQLAHARKWTLLIVLGEMGLVALFSYLLGNALTR 178
           P+TDV    G   G ++ GF     E    H      L+ + E+G + +   L+   L  
Sbjct: 312 PLTDV---RGERIGMIYTGFS----EAPFIH----NYLLNIIELGTILMLVLLVSGMLVY 360

Query: 179 R--------LTELKTATDQITFGNREVL--LEIQGHDEISRVAHSFQQMVQSLRHSEATM 228
           R        +  +      +  G    +  L ++  +E++ +A  F +M+  L+   A +
Sbjct: 361 RGAYSLLQPIERIHHVVKAVQSGRNVRIGELGLEKDNELANLAEQFDRMLDLLQRRNAQI 420

Query: 229 RDYQHQLEQWNLELEDKVNQRTETLLAKNQQLEEMNTKLTLMKDKLVETEKMISIGTLAA 288
           +    QLE        KV +RT +L  K ++L+   + L   + +LV  EK+ ++G L A
Sbjct: 421 QSAAEQLEL-------KVEERTRSLQEKTEELQRNVSLLNETRAQLVTNEKLTALGELTA 473

Query: 289 GFAHEINNPNGALKSHLQLLQQDFNQLKVGFEQIDILLSGSDFHGKFTQTKNALYLEESF 348
           G AHEINNP   +  +++LL+ +                                L +  
Sbjct: 474 GIAHEINNPTAVILGNMELLRSE--------------------------------LGDKA 501

Query: 349 SGIEESLRDALHCVDRIKTIV------DKVQRCQAEPALHDSSWV--SPLSLVEQAIQIC 400
             +EE +   +  V RI TI+       +     A   +H  + +    L LV  +I+  
Sbjct: 502 GQVEEEIDLVIQQVGRISTIIRSLLQYSRPGEFNAPLEMHQITPIIEEMLVLVRHSIK-- 559

Query: 401 GLREWVVWKEQTLYPPLIYCYSNDFVTALSAILNNAYQAYASDDPMIR-IELSLRHDHQQ 459
             +E V+ +E     P+           ++ ++N A+         IR  +  ++ +   
Sbjct: 560 -KQEVVLHQELNASCPVQINRPQLLQVLINLVVNAAHAMDGKGRIWIRTYDWVVQDEPVG 618

Query: 460 LEIEVRDFGRGMSIEEKQHAFDPFFTTHDVGKGVGLGLTEAYSSIKKYDGDIQLFSELRQ 519
           ++IE+ D G G++ E+    FDPF+TT     G GLGL+ +Y  IK+  G I++ S L +
Sbjct: 619 VKIEIEDEGCGIAPEQLGRIFDPFYTTRP--DGTGLGLSLSYGIIKRIGGTIEVTSTLGK 676

Query: 520 GTRVLITL 527
           GT   I L
Sbjct: 677 GTLFTIGL 684